RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ITGB1P05556 798 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 GTF2H1P32780 548 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 RPL9P32969 192 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 COPB1P53618 953 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 RBP5P82980 135 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 SMAD3P84022 425 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 TAP1Q03518 808 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 NCOA4Q13772 614 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 UPP1Q16831 310 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 ZACNQ401N2 412 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 FNDC1Q4ZHG4 1894 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 TMEM173Q86WV6 379 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 TAS1R2Q8TE23 839 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 BCL7CQ8WUZ0 217 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 TIFAQ96CG3 184 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 COLEC11Q9BWP8 271 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 SLC28A3Q9HAS3 691 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 MARCH5Q9NX47 278 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 LIMA1Q9UHB6 759 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 NUB1Q9Y5A7 615 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 ANK1P16157 1881 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 I3L4J1 428 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 TADA2AO75478 443 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 VNN1O95497 513 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 LINC00271P0C7V0 271 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 IGFBP6P24592 240 aaPredicted RBP14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 TAF6P49848 677 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 MYL6P60660 151 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 PLCB2Q00722 1185 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 CETN1Q12798 172 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 ZNF699Q32M78 642 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 MIIPQ5JXC2 388 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 SCARA5Q6ZMJ2 495 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 SLC39A11Q8N1S5 342 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 ARNTL2Q8WYA1 636 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 CLP1Q92989 425 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 TMEM169Q96HH4 297 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 TGS1Q96RS0 853 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 PI4K2AQ9BTU6 479 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 IMPG2Q9BZV3 1241 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 NDST4Q9H3R1 872 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 RWDD3Q9Y3V2 267 aa14.61□□□□□ -0.07
TM9SF4-204ENST00000442842 ANO9A1A5B4 782 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 CST3P01034 146 aaPredicted RBP14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 PPM1AP35813 382 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 BRCC3P46736 316 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 MYO1EQ12965 1108 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 LRIT3Q3SXY7 679 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 SV2CQ496J9 727 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 FILIP1LQ4L180 1135 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 SPOPLQ6IQ16 392 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 DCLRE1AQ6PJP8 1040 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 DSTYKQ6XUX3 929 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 CCDC150Q8NCX0 1101 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 FBXL13Q8NEE6 735 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 HPDLQ96IR7 371 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 CRACR2AQ9BSW2 395 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 RAB20Q9NX57 234 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 GCNT4Q9P109 453 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 ADAM28Q9UKQ2 775 aa14.6□□□□□ -0.07
TM9SF4-204ENST00000442842 CITO14578 2027 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 PDCD11Q14690 1871 aaKnown RBP14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 LGALS16A8MUM7 142 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 PIRO00625 290 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 SPTLC1O15269 473 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 FGF18O76093 207 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 CA8P35219 290 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 BMPR1AP36894 532 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 PNPLA4P41247 253 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 TNNC1P63316 161 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 FANCCQ00597 558 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 LRMPQ12912 555 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 PTPN21Q16825 1174 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 EPC2Q52LR7 807 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 FKBP15Q5T1M5 1219 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 FUT10Q6P4F1 479 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 KLHL23Q8NBE8 558 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 FBXO22Q8NEZ5 403 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 IGSF21Q96ID5 467 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 SAMD11Q96NU1 681 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 INTS2Q9H0H0 1204 aaKnown RBP14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 SF3B1O75533 1304 aaKnown RBP eCLIP14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 KIAA1671Q9BY89 1806 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 GBF1Q92538 1859 aa14.59□□□□□ -0.07
TM9SF4-204ENST00000442842 TDRD15B5MCY1 1934 aaKnown RBP14.58□□□□□ -0.07
TM9SF4-204ENST00000442842 TMEM189-UBE2V1I3L0A0 370 aa14.58□□□□□ -0.08
TM9SF4-204ENST00000442842 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
TM9SF4-204ENST00000442842 LRRN2O75325 713 aa14.58□□□□□ -0.08
TM9SF4-204ENST00000442842 MCCD1P59942 119 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms