RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PRR23AA6NEV1 266 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 ZNF197O14709 1029 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 ATF2P15336 505 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 PLCG1P19174 1290 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 CYP3A5P20815 502 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 TXLNAP40222 546 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 PRKCQQ04759 706 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 SLC10A6Q3KNW5 377 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 CYP4A22Q5TCH4 519 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 PDZD4Q76G19 769 aaPredicted RBP12.82□□□□□ -0.36
TTC28-203ENST00000442232 USP37Q86T82 979 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 LARP4BQ92615 738 aaKnown RBP12.82□□□□□ -0.36
TTC28-203ENST00000442232 DDX12PQ92771 950 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 KXD1Q9BQD3 176 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 OXCT2Q9BYC2 517 aaPredicted RBP12.82□□□□□ -0.36
TTC28-203ENST00000442232 MAFFQ9ULX9 164 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 NOTCH4Q99466 2003 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 OGTO15294 1046 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 TRAK2O60296 914 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 ABLIM3O94929 683 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 IGFBP6P24592 240 aaPredicted RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 GPC5P78333 572 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 YWHAHQ04917 246 aaPredicted RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 SPAG1Q07617 926 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 PLD1Q13393 1074 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 MCM6Q14566 821 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 SF3A1Q15459 793 aaKnown RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 MLF2Q15773 248 aaPredicted RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 ARSHQ5FYA8 562 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 TCEAL8Q8IYN2 117 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 BEST2Q8NFU1 509 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 PJA1Q8NG27 643 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 RAD54LQ92698 747 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 ZNF512Q96ME7 567 aaPredicted RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 MSTO1Q9BUK6 570 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 AFF4Q9UHB7 1163 aaKnown RBP12.81□□□□□ -0.36
TTC28-203ENST00000442232 TCHHQ07283 1943 aa12.81□□□□□ -0.36
TTC28-203ENST00000442232 TTC26A0AVF1 554 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 ECI2O75521 394 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 PIGRP01833 764 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 DCNP07585 359 aaKnown RBP12.8□□□□□ -0.36
TTC28-203ENST00000442232 ODC1P11926 461 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 CEBPBP17676 345 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 PAX3P23760 479 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 LRPAP1P30533 357 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
TTC28-203ENST00000442232 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
TTC28-203ENST00000442232 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 ASCL5Q7RTU5 278 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 CD302Q8IX05 232 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 LEMD2Q8NC56 503 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 RPP25Q9BUL9 199 aaKnown RBP12.8□□□□□ -0.36
TTC28-203ENST00000442232 BCO2Q9BYV7 579 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 ASAH2Q9NR71 780 aa12.8□□□□□ -0.36
TTC28-203ENST00000442232 ANK1P16157 1881 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 KANSL1LA0AUZ9 987 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 OR6C75A6NL08 312 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 LACTBL1A8MY62 500 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 M0QZQ0 153 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 TBC1D4O60343 1298 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 TNFSF9P41273 254 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 MAGEA9P43362 315 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 ZNF131P52739 623 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 STARD6P59095 220 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 TWF1Q12792 350 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 ARMCX5Q6P1M9 558 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 MAP4K3Q8IVH8 894 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 KCNN1Q92952 543 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 FOXQ1Q9C009 403 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 STK17AQ9UEE5 414 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 USP34Q70CQ2 3546 aa12.79□□□□□ -0.36
TTC28-203ENST00000442232 FAM186AA6NE01 2351 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 NCAM2O15394 837 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 MEFVO15553 781 aaPredicted RBP12.78□□□□□ -0.36
TTC28-203ENST00000442232 MICAL2O94851 1124 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 SEC24AO95486 1093 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 MYL4P12829 197 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 EPHB3P54753 998 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
TTC28-203ENST00000442232 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
TTC28-203ENST00000442232 ADALQ6DHV7 355 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms