RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 EFCAB3Q8N7B9 438 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 LENG9Q96B70 501 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 LXNQ9BS40 222 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 TMEM121Q9BTD3 319 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-202ENST00000439706 ARP10275 920 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 AMPD1P23109 780 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 TM4SF1P30408 202 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SHMT1P34896 483 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 C1orf186Q6ZWK4 172 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 B4GALNT2Q8NHY0 566 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 WHRNQ9P202 907 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 ITGB4P16144 1822 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 HAUS5O94927 633 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 ASMTLO95671 621 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 KIF22Q14807 665 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 DCLRE1BQ9H816 532 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 HARSP12081 509 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 IVDP26440 423 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 TAS2R40P59535 323 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 TFDP1Q14186 410 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 C4orf50Q6ZRC1 276 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 ZNF577Q9BSK1 485 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SYT11Q9BT88 431 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLC38A1-202ENST00000439706 EP400Q96L91 3159 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 GTPBP10A4D1E9 387 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 FESP07332 822 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 VHLP40337 213 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ICA1Q05084 483 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 FAM102BQ5T8I3 360 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 TEX9Q8N6V9 391 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 USP6NLQ92738 828 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 PTPRN2Q92932 1015 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 EPAS1Q99814 870 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 THTPAQ9BU02 230 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 TMEM109Q9BVC6 243 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 AHCYL1O43865 530 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 PTPN4P29074 926 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 PGM1P36871 562 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ALCAMQ13740 583 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 LRRC74BQ6ZQY2 392 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 LMO3Q8TAP4 145 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 OSBPL8Q9BZF1 889 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 FAM237BA0A1B0GVD1 139 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 B2RBV5 119 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 MAP3K7O43318 606 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ALAS1P13196 640 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ARFIP2P53365 341 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 NR1H3Q13133 447 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.13□□□□□ -0.315e-6■■■■■ 55.7
SLC38A1-202ENST00000439706 CCDC89Q8N998 374 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 FAM111AQ96PZ2 611 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 PCMTD2Q9NV79 361 aa13.13□□□□□ -0.31
SLC38A1-202ENST00000439706 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms