RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 NT5DC4Q86YG4 428 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 FAM213AQ9BRX8 229 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 ZDHHC7Q9NXF8 308 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 UBE4BO95155 1302 aa26.83■■□□□ 1.89
RAPGEF1-206ENST00000438647 PLXNA3P51805 1871 aa26.83■■□□□ 1.88
RAPGEF1-206ENST00000438647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 FAM237AA0A1B0GTK4 181 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 CCDC195A0A1B0GUA6 201 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 PI4K2BG5E9Z4 385 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 MYL1P05976 194 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 NFICP08651 508 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 WEE2P0C1S8 567 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 SPATA31D3P0C874 917 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 OR1D2P34982 312 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 EHHADHQ08426 723 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 RAB33AQ14088 237 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 VARS2Q5ST30 1063 aaKnown RBP26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 LIN9Q5TKA1 542 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 CRELD2Q6UXH1 353 aaPredicted RBP26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 SPATA31D4Q6ZUB0 917 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 RNF135Q8IUD6 432 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 PAGE5Q96GU1 130 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 FBXW11Q9UKB1 542 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 CDY1Q9Y6F8 540 aa26.82■■□□□ 1.88
RAPGEF1-206ENST00000438647 DCXO43602 365 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 EXTL3O43909 919 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 CASP1P29466 404 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 EPM2AIP1Q7L775 607 aaPredicted RBP26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 BRSK2Q8IWQ3 736 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 GLIS3Q8NEA6 775 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 ZNF507Q8TCN5 953 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 KHSRPQ92945 711 aaKnown RBP eCLIP26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 SAAL1Q96ER3 474 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 CBWD1Q9BRT8 395 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 TSHZ2Q9NRE2 1034 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 PCDHB8Q9UN66 801 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 USTQ9Y2C2 406 aa26.81■■□□□ 1.88
RAPGEF1-206ENST00000438647 TCHHQ07283 1943 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 RFPL2O75678 378 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 PAPLNO95428 1278 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 GUCY2FP51841 1108 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 CCDC149Q6ZUS6 474 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 EPHX3Q9H6B9 360 aa26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 RBAKQ9NYW8 714 aaPredicted RBP26.8■■□□□ 1.88
RAPGEF1-206ENST00000438647 M0QZQ0 153 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 ADAM12O43184 909 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 ZMYND10O75800 440 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 AARSP49588 968 aaKnown RBP eCLIP26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 NDUFA8P51970 172 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 SNRPFP62306 86 aaKnown RBP26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 C9orf57Q5W0N0 161 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 SLC8B1Q6J4K2 584 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 ZNF280DQ6N043 979 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 RTL10Q7L3V2 364 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 GRAMD1CQ8IYS0 662 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 GPD1LQ8N335 351 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 FSIP1Q8NA03 581 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 SMG7Q92540 1137 aaKnown RBP26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 PCIF1Q9H4Z3 704 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 PIDD1Q9HB75 910 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 GDPD2Q9HCC8 539 aa26.79■■□□□ 1.88
RAPGEF1-206ENST00000438647 MTCL1Q9Y4B5 1905 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 ARHGEF37A1IGU5 675 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 MRPL58Q14197 206 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 UVSSAQ2YD98 709 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 DSTYKQ6XUX3 929 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 HS2ST1Q7LGA3 356 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 TDRD5Q8NAT2 981 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 NOC3LQ8WTT2 800 aaKnown RBP26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 CCDC34Q96HJ3 373 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 OXCT2Q9BYC2 517 aaPredicted RBP26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 PRKD2Q9BZL6 878 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 EXOC1Q9NV70 894 aa26.78■■□□□ 1.88
RAPGEF1-206ENST00000438647 C8AP07357 584 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 HNRNPA1P09651 372 aaKnown RBP eCLIP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 SP100P23497 879 aaPredicted RBP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 HOXA9P31269 272 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 HOXD13P35453 343 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 YWHAHQ04917 246 aaPredicted RBP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 PSMD2Q13200 908 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 CTXN3Q4LDR2 81 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 PPM1LQ5SGD2 360 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 RSPO2Q6UXX9 243 aaPredicted RBP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 USP37Q86T82 979 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 PLCD3Q8N3E9 789 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 SCFD1Q8WVM8 642 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 ACSF2Q96CM8 615 aaPredicted RBP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 KIAA1586Q9HCI6 787 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 SLC39A2Q9NP94 309 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 DPP3Q9NY33 737 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 CGNQ9P2M7 1197 aaKnown RBP26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 MUTYHQ9UIF7 546 aa26.77■■□□□ 1.88
RAPGEF1-206ENST00000438647 ANO9A1A5B4 782 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 GOLGA8IPA6NC78 632 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 GOLGA6L4A6NEF3 574 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 GOLGA8JA6NMD2 632 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 PIRO00625 290 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 TBC1D4O60343 1298 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 LILRA4P59901 499 aa26.76■■□□□ 1.87
RAPGEF1-206ENST00000438647 ROR1Q01973 937 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms