RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 AGPAT5Q9NUQ2 364 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 CDY1Q9Y6F8 540 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 CACNA1DQ01668 2161 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 CSMD1Q96PZ7 3565 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
RTN4-211ENST00000438462 NEDD4P46934 1319 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 PRRG1O14668 218 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 ITGA4P13612 1032 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 DRD1P21728 446 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.417e-8■■□□□ 13
RTN4-211ENST00000438462 KIF5BP33176 963 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 HAND2P61296 217 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 PSMD2Q13200 908 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 DRP2Q13474 957 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 FBXO43Q4G163 708 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
RTN4-211ENST00000438462 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
RTN4-211ENST00000438462 CDC6Q99741 560 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 NF1P21359 2839 aa12.49□□□□□ -0.41
RTN4-211ENST00000438462 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
RTN4-211ENST00000438462 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 SUV39H1O43463 412 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 BRINP1O60477 761 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 NDUFV2P19404 249 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 CLDN6P56747 220 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 TLE1Q04724 770 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
RTN4-211ENST00000438462 PTPAQ15257 358 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 PLEKHG6Q3KR16 790 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 KIAA1614Q5VZ46 1190 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 TBC1D10CQ8IV04 446 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 ARID3BQ8IVW6 561 aaPredicted RBP12.48□□□□□ -0.41
RTN4-211ENST00000438462 MIER1Q8N108 512 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 SMG8Q8ND04 991 aaKnown RBP12.48□□□□□ -0.41
RTN4-211ENST00000438462 SHKBP1Q8TBC3 707 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 UBN1Q9NPG3 1134 aa12.48□□□□□ -0.41
RTN4-211ENST00000438462 PLEKHB1Q9UF11 243 aaPredicted RBP12.48□□□□□ -0.41
RTN4-211ENST00000438462 DPYSL4O14531 572 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 KIF4AO95239 1232 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 GRIK2Q13002 908 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 RTP5Q14D33 572 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 ZMYM1Q5SVZ6 1142 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 STXBP5Q5T5C0 1151 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 MIS18BP1Q6P0N0 1132 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 LPIN3Q9BQK8 851 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
RTN4-211ENST00000438462 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 MTRRQ9UBK8 725 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 MAD2L2Q9UI95 211 aa12.47□□□□□ -0.41
RTN4-211ENST00000438462 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 OTOL1A6NHN0 477 aaPredicted RBP12.46□□□□□ -0.41
RTN4-211ENST00000438462 AP5Z1O43299 807 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 ELF1P32519 619 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 GALK1P51570 392 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 TBC1D25Q3MII6 688 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 IQCEQ6IPM2 695 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
RTN4-211ENST00000438462 ELMOD1Q8N336 334 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
RTN4-211ENST00000438462 RHBDD1Q8TEB9 315 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 ESR2Q92731 530 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 INO80BQ9C086 356 aaPredicted RBP12.46□□□□□ -0.41
RTN4-211ENST00000438462 NRSN2Q9GZP1 204 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 IL21RQ9HBE5 538 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 HES2Q9Y543 173 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 IPPQ9Y573 584 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 MAFBQ9Y5Q3 323 aaPredicted RBP12.46□□□□□ -0.41
RTN4-211ENST00000438462 INSL5Q9Y5Q6 135 aa12.46□□□□□ -0.41
RTN4-211ENST00000438462 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.42
RTN4-211ENST00000438462 MYLKQ15746 1914 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 A0A1W2PRU2 124 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 CYTH3O43739 400 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 ACTN2P35609 894 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 HNF1BP35680 557 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 EPHA5P54756 1037 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 RPL6Q02878 288 aaKnown RBP12.45□□□□□ -0.42
RTN4-211ENST00000438462 VAC14Q08AM6 782 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 IQCA1Q86XH1 822 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 BPIFB1Q8TDL5 484 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 PIBF1Q8WXW3 757 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 TSC1Q92574 1164 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 P2RY13Q9BPV8 354 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
RTN4-211ENST00000438462 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms