RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ZSCAN18Q8TBC5 510 aaPredicted RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 OXER1Q8TDS5 423 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 MSANTD3Q96H12 275 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 TMX3Q96JJ7 454 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 ZNF512Q96ME7 567 aaPredicted RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 ZSWIM3Q96MP5 696 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 SLITRK6Q9H5Y7 841 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 BAHCC1Q9P281 2608 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 SLC38A8A6NNN8 435 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 HEPACAM2A8MVW5 462 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 AXIN1O15169 862 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 PAPSS2O95340 614 aaPredicted RBP15.45■□□□□ 0.06
LINC01088-201ENST00000437737 SEC24AO95486 1093 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 GJA1P17302 382 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 ATP2B1P20020 1258 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 LIMK1P53667 647 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 SHC2P98077 582 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 COL9A2Q14055 689 aaPredicted RBP15.45■□□□□ 0.06
LINC01088-201ENST00000437737 CCDC6Q16204 474 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 CALCRLQ16602 461 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 EEF1DP3Q658K8 133 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 Q6ZS52 159 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 MFSD6LQ8IWD5 586 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 TCEAL8Q8IYN2 117 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 DEPTORQ8TB45 409 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 INTS4Q96HW7 963 aaKnown RBP15.45■□□□□ 0.06
LINC01088-201ENST00000437737 ARRDC1-AS1Q9H2J1 176 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
LINC01088-201ENST00000437737 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
LINC01088-201ENST00000437737 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
LINC01088-201ENST00000437737 H7C4K7 107 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 ACKR2O00590 384 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 SOX9P48436 509 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 TWF1Q12792 350 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 CUL4AQ13619 759 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 TEAD2Q15562 447 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 EARS2Q5JPH6 523 aaKnown RBP15.44■□□□□ 0.06
LINC01088-201ENST00000437737 DGKKQ5KSL6 1271 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 LEMD2Q8NC56 503 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 E2F7Q96AV8 911 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 C8orf33Q9H7E9 229 aaPredicted RBP15.44■□□□□ 0.06
LINC01088-201ENST00000437737 ASAH2Q9NR71 780 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 GJB4Q9NTQ9 266 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 TPCN1Q9ULQ1 816 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 FAM208BQ5VWN6 2430 aa15.44■□□□□ 0.06
LINC01088-201ENST00000437737 NCANO14594 1321 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 ARNTLO00327 626 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 MOSPD3O75425 235 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 CDKL5O76039 1030 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 EDN1P05305 212 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 PROS1P07225 676 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 XRCC6P12956 609 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC01088-201ENST00000437737 TXKP42681 527 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 MLLT6P55198 1093 aaPredicted RBP15.43■□□□□ 0.06
LINC01088-201ENST00000437737 CTXN3Q4LDR2 81 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 TPGS2Q68CL5 300 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 APBB1IPQ7Z5R6 666 aaPredicted RBP15.43■□□□□ 0.06
LINC01088-201ENST00000437737 WDR5BQ86VZ2 330 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 BSNDQ8WZ55 320 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 CCDC113Q9H0I3 377 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 TRPV4Q9HBA0 871 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 RXFP3Q9NSD7 469 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 FBXL5Q9UKA1 691 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 SDK1Q7Z5N4 2213 aa15.43■□□□□ 0.06
LINC01088-201ENST00000437737 KIF26AQ9ULI4 1882 aaPredicted RBP15.42■□□□□ 0.06
LINC01088-201ENST00000437737 SMIM28A0A1B0GU29 152 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 SPECC1L-ADORA2AF8WAN1 911 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 PODXLO00592 558 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 SYN3O14994 580 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 CHADO15335 359 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 NAMPTP43490 491 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 YARSP54577 528 aaKnown RBP15.42■□□□□ 0.06
LINC01088-201ENST00000437737 SOX4Q06945 474 aaPredicted RBP15.42■□□□□ 0.06
LINC01088-201ENST00000437737 STPG1Q5TH74 334 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 ATF7IP2Q5U623 682 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 TTC8Q8TAM2 541 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 GPR88Q9GZN0 384 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 TOPORSQ9NS56 1045 aaPredicted RBP15.42■□□□□ 0.06
LINC01088-201ENST00000437737 C2orf42Q9NWW7 574 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 CEP72Q9P209 647 aa15.42■□□□□ 0.06
LINC01088-201ENST00000437737 TM4SF5O14894 197 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 PFKFB2O60825 505 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 EPN2O95208 641 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 KCNK5O95279 499 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 CCDC192P0DO97 292 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
LINC01088-201ENST00000437737 CPB1P15086 417 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 HOXC13P31276 330 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 NR5A1Q13285 461 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 PON2Q15165 354 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 PPP2R5AQ15172 486 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 ME3Q16798 604 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 ZNF280DQ6N043 979 aa15.41■□□□□ 0.06
LINC01088-201ENST00000437737 TXNDC11Q6PKC3 985 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms