RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NEBLO76041 1014 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 NRLP54845 237 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 RWDD2BP57060 319 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF844Q08AG5 666 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 NEDD9Q14511 834 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 SNCBQ16143 134 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 SPRED3Q2MJR0 410 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 GLE1Q53GS7 698 aaKnown RBP16.57■□□□□ 0.24
SCARF1-203ENST00000434376 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 TCP11Q8WWU5 503 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 LRRC45Q96CN5 670 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 ERP44Q9BS26 406 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 FZD9O00144 591 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 SKAP2O75563 359 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CLTAP09496 248 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CXCL8P10145 99 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CTNNA2P26232 953 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CALCOCO2Q13137 446 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 MTUS1Q9ULD2 1270 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 ECHS1P30084 290 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 TAS2R40P59535 323 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 KRT17Q04695 432 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 ZKSCAN8Q15776 578 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-203ENST00000434376 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-203ENST00000434376 DENND2CQ68D51 928 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CACNA2D3Q8IZS8 1091 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 DYDC1Q8WWB3 177 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 CEP83Q9Y592 693 aa16.57■□□□□ 0.24
SCARF1-203ENST00000434376 FNTAP49354 379 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 NRBP2Q9NSY0 501 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 LRRD1A4D1F6 860 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 GMNCA6NCL1 334 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 FAM107AO95990 144 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
SCARF1-203ENST00000434376 KYNUQ16719 465 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 TXNRD3NBQ6F5E7 133 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 HIBCHQ6NVY1 386 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-203ENST00000434376 NETO2Q8NC67 525 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 CAVIN3Q969G5 261 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 PCYT2Q99447 389 aa16.56■□□□□ 0.24
SCARF1-203ENST00000434376 MRPL42Q9Y6G3 142 aaKnown RBP16.56■□□□□ 0.24
SCARF1-203ENST00000434376 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 F8VP50 259 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 VNN1O95497 513 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 FOXR2Q6PJQ5 311 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 SLC13A5Q86YT5 568 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ARFGAP2Q8N6H7 521 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 GDAP1Q8TB36 358 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 RAB17Q9H0T7 212 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF148Q9UQR1 794 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 HES2Q9Y543 173 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 CCDC188H7C350 402 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 EXTL3O43909 919 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 PRKCBP05771 671 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 CREB1P16220 341 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ACAD10Q6JQN1 1059 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 TMC3Q7Z5M5 1100 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 UBA3Q8TBC4 463 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 LENG1Q96BZ8 264 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 CARD9Q9H257 536 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 RNPEPQ9H4A4 650 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 MINDY3Q9H8M7 445 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 RASAL2Q9UJF2 1139 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 FSBPO95073 299 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ELF1P32519 619 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 LACTBP83111 547 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 CUL2Q13617 745 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 ALCAMQ13740 583 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 FAM133BQ5BKY9 247 aaKnown RBP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 EFCAB12Q6NXP0 572 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 SLFN11Q7Z7L1 901 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCARF1-203ENST00000434376 SEPT1Q8WYJ6 367 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
SCARF1-203ENST00000434376 HMGB1P1B2RPK0 211 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-203ENST00000434376 BANF1O75531 89 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 VIMP08670 466 aaKnown RBP16.54■□□□□ 0.24
SCARF1-203ENST00000434376 CDC25CP30307 473 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 RGS7P49802 495 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 MAPK6Q16659 721 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 GPAT2Q6NUI2 795 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 NIPA1Q7RTP0 329 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 PARP9Q8IXQ6 854 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 OPTNQ96CV9 577 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 UBE4BO95155 1302 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms