RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 PHIPQ8WWQ0 1821 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ZNF197O14709 1029 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SLC9A3R1O14745 358 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 DDHD2O94830 711 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CXCL14O95715 111 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ACOT2P49753 483 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CCDC6Q16204 474 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 OR8K1Q8NGG5 319 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TSC1Q92574 1164 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CGRRF1Q99675 332 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 RSAD1Q9HA92 442 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 IL23AQ9NPF7 189 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 EIF3CLB5ME19 914 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TUFMP49411 452 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TWF1Q12792 350 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 LY6KQ17RY6 165 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 KIAA1324Q6UXG2 1013 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SZRD1Q7Z422 152 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ACRBPQ8NEB7 543 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 FLCNQ8NFG4 579 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 EIF3CQ99613 913 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 EDEM3Q9BZQ6 932 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 NSRP1Q9H0G5 558 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CLDND1Q9NY35 253 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SCINQ9Y6U3 715 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CASTOR2A6NHX0 329 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SGK1O00141 431 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 COBLO75128 1261 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 EYA4O95677 639 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TIMP1P01033 207 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 FAM200BP0CF97 657 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 RALBP11234 206 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ATP5DP30049 168 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 NPEPPSP55786 919 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 YWHAGP61981 247 aaKnown RBP eCLIP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 PSMC1P62191 440 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 CNTN2Q02246 1040 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 YWHAHQ04917 246 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SGCGQ13326 291 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SLC39A14Q15043 492 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 POLD3Q15054 466 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 POTEDQ86YR6 584 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TRIB2Q92519 343 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 DHX38Q92620 1227 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 MAML3Q96JK9 1138 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 TIGD1Q96MW7 591 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 KIFC3Q9BVG8 833 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 SARS2Q9NP81 518 aaKnown RBP7.67□□□□□ -1.18
CNOT4-206ENST00000428680 GABRQQ9UN88 632 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ITIH6Q6UXX5 1313 aa7.67□□□□□ -1.18
CNOT4-206ENST00000428680 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SMARCA1P28370 1054 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 GNL1P36915 607 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 MAGEA10P43363 369 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 FANCCQ00597 558 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 TLE2Q04725 743 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ZNF177Q13360 481 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 TFDP2Q14188 446 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ADCK5Q3MIX3 580 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PABPC1LQ4VXU2 614 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 TREML2Q5T2D2 321 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 KRT39Q6A163 491 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SH3BP5LQ7L8J4 393 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 TAS2R42Q7RTR8 314 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 DSG4Q86SJ6 1040 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PSMB7Q99436 277 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PDCD2LQ9BRP1 358 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 TUBGCP2Q9BSJ2 902 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 NFKBIZQ9BYH8 718 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 LSG1Q9H089 658 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 DDX4Q9NQI0 724 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 HCN4Q9Y3Q4 1203 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ARVCFO00192 962 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ATP1A1P05023 1023 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SERPINB6P35237 376 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ALDH5A1P51649 535 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 LMNB2Q03252 620 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PHKG1Q16816 387 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 FAM102AQ5T9C2 384 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PLPP4Q5VZY2 271 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 MFSD5Q6N075 450 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 C12orf50Q8NA57 414 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 MED15Q96RN5 788 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 JMJD4Q9H9V9 463 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ANKEF1Q9NU02 776 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 NCDNQ9UBB6 729 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 UXTQ9UBK9 157 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 KIAA0100Q14667 2235 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 NFIBO00712 420 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 DYNC1I1O14576 645 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 GFPT2O94808 682 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SLFN14P0C7P3 912 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SHMT1P34896 483 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PHBP35232 272 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 PAPOLAP51003 745 aaKnown RBP7.66□□□□□ -1.18
CNOT4-206ENST00000428680 MAN2A1Q16706 1144 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 ZNF792Q3KQV3 632 aa7.66□□□□□ -1.18
CNOT4-206ENST00000428680 SRBD1Q8N5C6 995 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms