RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 HSPBP1Q9NZL4 362 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 TTC7AQ9ULT0 858 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 LRRC53A6NM62 1247 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 PDGFRAP16234 1089 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 EPHB4P54760 987 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 KRT72Q14CN4 511 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF484Q5JVG2 852 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 KCTD16Q68DU8 428 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 C11orf96Q7Z7L8 435 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF34Q8IZ26 560 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 CEP19Q96LK0 163 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 KIF2CQ99661 725 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 CAPS2Q9BXY5 557 aa10.46□□□□□ -0.73
CLTCL1-202ENST00000427926 PODXLO00592 558 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 RGS4P49798 205 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 PCSK7Q16549 785 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 RABGAP1LQ5R372 815 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 PLA2G4FQ68DD2 849 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 ZC3H18Q86VM9 953 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 FBXO16Q8IX29 292 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 TMEM199Q8N511 208 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 PPM1NQ8N819 430 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 DDI1Q8WTU0 396 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 CAPN10Q9HC96 672 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 WDR35Q9P2L0 1181 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 F5H5T6 163 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 SUPT3HO75486 399 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 PYGBP11216 843 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 NCAM1P13591 858 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 NMT1P30419 496 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 BACE1P56817 501 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 ETF1P62495 437 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 HDLBPQ00341 1268 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 C2orf54Q08AI8 447 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 ITPK1Q13572 414 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 NECTIN1Q15223 517 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 SPDYAQ5MJ70 313 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 GPRASP2Q96D09 838 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 PPP1R2P1Q96PQ5 205 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 MXRA8Q9BRK3 442 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 YY1AP1Q9H869 796 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 SYTL2Q9HCH5 934 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 FBXO10Q9UK96 956 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 LRRC7Q96NW7 1537 aa10.46□□□□□ -0.74
CLTCL1-202ENST00000427926 FKTNO75072 461 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 AKR1A1P14550 325 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 ATP11CQ8NB49 1132 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 USP13Q92995 863 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 ZMYND12Q9H0C1 365 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 PSD3Q9NYI0 1048 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 PPP1R9AQ9ULJ8 1098 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 GAS2O43903 313 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 PCDH8O95206 1070 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CLTAP09496 248 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CLNS1AP54105 237 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 PDIA6Q15084 440 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 KIZQ2M2Z5 673 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 TRIM68Q6AZZ1 485 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 NBPF10Q6P3W6 841 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CHMP1BQ7LBR1 199 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CARNMT1Q8N4J0 409 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 NBPF15Q8N660 670 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 NAF1Q96HR8 494 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 SENP7Q9BQF6 1050 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 SLC39A10Q9ULF5 831 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CAP2P40123 477 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 KRT31Q15323 416 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 HIST2H2ACQ16777 129 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 FSCBQ5H9T9 825 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 HIST2H2AA3Q6FI13 130 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 AGAP3Q96P47 875 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 TRIM55Q9BYV6 548 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 RUBCNLQ9H714 662 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 CYP4F11Q9HBI6 524 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 KANSL3Q9P2N6 904 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 TRAF3IP3Q9Y228 551 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 NCKAP1Q9Y2A7 1128 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 SUPT3HB4E1H0 165 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 ZNF263O14978 683 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 FTLP02792 175 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 AARS2Q5JTZ9 985 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 KRT80Q6KB66 452 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 USP50Q70EL3 339 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 ZNF438Q7Z4V0 828 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 GPC2Q8N158 579 aa10.45□□□□□ -0.74
CLTCL1-202ENST00000427926 HES6Q96HZ4 224 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms