RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 POMCP01189 267 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 PYGLP06737 847 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 IFNA8P32881 189 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 C1orf146Q5VVC0 180 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPG11-202ENST00000427534 GPR63Q9BZJ6 419 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 KIAA1586Q9HCI6 787 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 KLF15Q9UIH9 416 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 USP27XA6NNY8 438 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 EXOSC10Q01780 885 aaKnown RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 CHSY1Q86X52 802 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 SLC44A2Q8IWA5 706 aaPredicted RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 PGLYRP2Q96PD5 576 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 KLF6Q99612 283 aaPredicted RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 TRIM54Q9BYV2 358 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 GOLPH3Q9H4A6 298 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 MBL2P11226 248 aaPredicted RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 HSD17B4P51659 736 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 CDH18Q13634 790 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 ALKBH2Q6NS38 261 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 ZNF614Q8N883 585 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 TMA16Q96EY4 203 aaKnown RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 GYG2O15488 501 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 CLCN3P51790 818 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 CUL3Q13618 768 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 LRRC36Q1X8D7 754 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 SHC4Q6S5L8 630 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 SLC30A10Q6XR72 485 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 JADE3Q92613 823 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 OPTNQ96CV9 577 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 NAF1Q96HR8 494 aaKnown RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 HERC5Q9UII4 1024 aaKnown RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 USP20Q9Y2K6 914 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
SPG11-202ENST00000427534 TSPAN3O60637 253 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 VCAM1P19320 739 aa13.84□□□□□ -0.19
SPG11-202ENST00000427534 TFDP2Q14188 446 aa13.83□□□□□ -0.19
SPG11-202ENST00000427534 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.19
SPG11-202ENST00000427534 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.19
SPG11-202ENST00000427534 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.19
SPG11-202ENST00000427534 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.19
SPG11-202ENST00000427534 KCNB1Q14721 858 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CASP8Q14790 479 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 IFNEQ86WN2 208 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 C10orf53Q8N6V4 93 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 NDUFS3O75489 264 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CPT1AP50416 773 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 PTRHD1Q6GMV3 140 aaKnown RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 LLGL2Q6P1M3 1020 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 ACER1Q8TDN7 264 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 AGPAT1Q99943 283 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 ADM5C9JUS6 153 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 GTF2H1P32780 548 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 NME5P56597 212 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 SPARCL1Q14515 664 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 TRIM51Q9BSJ1 452 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CTIFO43310 598 aaKnown RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 GGCXP38435 758 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 HARS2P49590 506 aaKnown RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 DDX39BQ13838 428 aaKnown RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 AMACRQ9UHK6 382 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CHRM3P20309 590 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 MAP2K2P36507 400 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 SLC16A1P53985 500 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 SNRNP35Q16560 246 aaKnown RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 HIF1AQ16665 826 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 P3H1Q32P28 736 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 ALS2CLQ60I27 953 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 HIBCHQ6NVY1 386 aaPredicted RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
SPG11-202ENST00000427534 KIF2CQ99661 725 aa13.83□□□□□ -0.2
SPG11-202ENST00000427534 CASP4P49662 377 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 PRMT6Q96LA8 375 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 NFKBIZQ9BYH8 718 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 C20orf96Q9NUD7 363 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 MAPK13O15264 365 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 ATP1A1P05023 1023 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 CAPZA2P47755 286 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 FBXO38Q6PIJ6 1188 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 SGF29Q96ES7 293 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 SERPINI1Q99574 410 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 TRIM15Q9C019 465 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
SPG11-202ENST00000427534 CUL1Q13616 776 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 LY6KQ17RY6 165 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms