RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 STC2O76061 302 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 MMP10P09238 476 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 HSPA8P11142 646 aaKnown RBP6.96□□□□□ -1.3
C9orf3-205ENST00000427193 VEGFAP15692 232 aaPredicted RBP6.96□□□□□ -1.3
C9orf3-205ENST00000427193 DPEP1P16444 411 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 POU3F2P20265 443 aaPredicted RBP6.96□□□□□ -1.3
C9orf3-205ENST00000427193 KCNA3P22001 575 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 DSG1Q02413 1049 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 ESPNLQ6ZVH7 1005 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 CDYL2Q8N8U2 506 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 ING3Q9NXR8 418 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 TAF1LQ8IZX4 1826 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 PCDH11XQ9BZA7 1347 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 PCDH11YQ9BZA8 1340 aa6.96□□□□□ -1.3
C9orf3-205ENST00000427193 BRCA1P38398 1863 aaKnown RBP6.96□□□□□ -1.3
C9orf3-205ENST00000427193 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
C9orf3-205ENST00000427193 TRIM24O15164 1050 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 RNMTO43148 476 aaKnown RBP6.95□□□□□ -1.3
C9orf3-205ENST00000427193 HOXA3O43365 443 aaPredicted RBP6.95□□□□□ -1.3
C9orf3-205ENST00000427193 RECQL4O94761 1208 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 ALDH1A2O94788 518 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 RHOBTB3O94955 611 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 PCDH8O95206 1070 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 ITGB1P05556 798 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 COL10A1Q03692 680 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 LMOD3Q0VAK6 560 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 TCEA2Q15560 299 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 LY6G5CQ5SRR4 150 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
C9orf3-205ENST00000427193 LRRC55Q6ZSA7 311 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 PIK3C3Q8NEB9 887 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 THUMPD2Q9BTF0 503 aaKnown RBP6.95□□□□□ -1.3
C9orf3-205ENST00000427193 DOT1LQ8TEK3 1739 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 KIAA1551Q9HCM1 1747 aa6.95□□□□□ -1.3
C9orf3-205ENST00000427193 SBF1O95248 1867 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 UBR3Q6ZT12 1888 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 GLTPD2A6NH11 291 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 ERVV-2B6SEH9 535 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 KPNA6O60684 536 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 HK1P19367 917 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 WNT3AP56704 352 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 DCTN1Q14203 1278 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 MCM10Q7L590 875 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 PROKR1Q8TCW9 393 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 FERMT2Q96AC1 680 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 RNF123Q5XPI4 1314 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 PALLDQ8WX93 1383 aa6.94□□□□□ -1.3
C9orf3-205ENST00000427193 DLG5Q8TDM6 1919 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 N4BP2Q86UW6 1770 aaPredicted RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 NRP2O60462 931 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 SEC24DO94855 1032 aaPredicted RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 ABHD16AO95870 558 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 HSP90AB1P08238 724 aaKnown RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 NR4A1P22736 598 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 GPR15P49685 360 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 NEK4P51957 841 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 CD69Q07108 199 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 PTPAQ15257 358 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 FAM214AQ32MH5 1076 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 CCDC178Q5BJE1 867 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 FAM83AQ86UY5 434 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 NXPE1Q8N323 547 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 GLB1L3Q8NCI6 653 aaPredicted RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 OR5M3Q8NGP4 307 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 CPPED1Q9BRF8 314 aaPredicted RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 EPC1Q9H2F5 836 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
C9orf3-205ENST00000427193 MSRAQ9UJ68 235 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 FANCIQ9NVI1 1328 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 C4BP0C0L5 1744 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 TOGARAM1Q9Y4F4 1720 aa6.93□□□□□ -1.3
C9orf3-205ENST00000427193 SIPA1L3O60292 1781 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 ZNF891A8MT65 544 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 LY86O95711 162 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 PFKMP08237 780 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 GYPEP15421 78 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 KPNA1P52294 538 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 GNAI1P63096 354 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 TAF7Q15545 349 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 C1orf141Q5JVX7 400 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 MBNL2Q5VZF2 373 aaKnown RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 OR52N2Q8NGI0 321 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 IL17RAQ96F46 866 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 ZNF496Q96IT1 587 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 FAM193BQ96PV7 902 aaPredicted RBP6.92□□□□□ -1.3
C9orf3-205ENST00000427193 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 HS3ST4Q9Y661 456 aa6.92□□□□□ -1.3
C9orf3-205ENST00000427193 SCN11AQ9UI33 1791 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 TGM5O43548 720 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 DNAJC6O75061 913 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms