RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DMP1Q13316 513 aaPredicted RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 SNW1Q13573 536 aaKnown RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 STK38Q15208 465 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 TMEM119Q4V9L6 283 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 PABPC1LQ4VXU2 614 aaKnown RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 SLC44A4Q53GD3 710 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 TCEAL8Q8IYN2 117 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 ADSSL1Q8N142 457 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 TCEAL4Q96EI5 215 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 SUSD3Q96L08 255 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 AK8Q96MA6 479 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 DRC1Q96MC2 740 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 USP28Q96RU2 1077 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 KXD1Q9BQD3 176 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 TFIP11Q9UBB9 837 aaKnown RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 FBXL5Q9UKA1 691 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 POLIQ9UNA4 740 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 R4GN57 208 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 COL4A2P08572 1712 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 CACNA1AO00555 2505 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 SYN3O14994 580 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 TRAPPC3O43617 180 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 FAM189A1O60320 539 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 PLS3P13797 630 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 ATF2P15336 505 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 CEBPBP17676 345 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 RPL9P32969 192 aaKnown RBP14.16□□□□□ -0.14
VRK3-203ENST00000424804 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
VRK3-203ENST00000424804 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
VRK3-203ENST00000424804 MCL1Q07820 350 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 TANGO2Q6ICL3 276 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 MTSS1LQ765P7 747 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 C1orf210Q8IVY1 113 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 ZNF687Q8N1G0 1237 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 MCRS1Q96EZ8 462 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 ZNF396Q96N95 335 aaPredicted RBP14.16□□□□□ -0.14
VRK3-203ENST00000424804 CLIC6Q96NY7 704 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
VRK3-203ENST00000424804 TOPORSQ9NS56 1045 aaPredicted RBP14.16□□□□□ -0.14
VRK3-203ENST00000424804 ANK1P16157 1881 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 KANSL1LA0AUZ9 987 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 TTC26A0AVF1 554 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 ECI2O75521 394 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 TOM1L1O75674 476 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 ADRB2P07550 413 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 ZSCAN22P10073 491 aaPredicted RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 PLCG1P19174 1290 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 TXLNAP40222 546 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 AARSP49588 968 aaKnown RBP eCLIP14.15□□□□□ -0.14
VRK3-203ENST00000424804 NCKAP1LP55160 1127 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 PTPAQ15257 358 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 MLF2Q15773 248 aaPredicted RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 ZPBP2Q6X784 338 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 APBB1IPQ7Z5R6 666 aaPredicted RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 KCTD17Q8N5Z5 321 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 BEST2Q8NFU1 509 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 DDX12PQ92771 950 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 ZHX3Q9H4I2 956 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 SLC38A7Q9NVC3 462 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 CEP72Q9P209 647 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 TUBGCP4Q9UGJ1 667 aa14.15□□□□□ -0.14
VRK3-203ENST00000424804 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 MRPS23Q9Y3D9 190 aaKnown RBP14.15□□□□□ -0.14
VRK3-203ENST00000424804 NCANO14594 1321 aa14.15□□□□□ -0.15
VRK3-203ENST00000424804 CEP250Q9BV73 2442 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 M0QZQ0 153 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 F13A1P00488 732 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 PTPN2P17706 415 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 CD72P21854 359 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 LRPAP1P30533 357 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 TNFSF9P41273 254 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 PRKCQQ04759 706 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 PKP1Q13835 747 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 ZBTB41Q5SVQ8 909 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 USP49Q70CQ1 688 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 CLDN23Q96B33 292 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 ZSWIM3Q96MP5 696 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 TCHPQ9BT92 498 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 LRRC3Q9BY71 257 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 OSBPL6Q9BZF3 934 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 CRISPLD1Q9H336 500 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 GDE1Q9NZC3 331 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
VRK3-203ENST00000424804 INSL5Q9Y5Q6 135 aa14.14□□□□□ -0.15
VRK3-203ENST00000424804 MICAL2O94851 1124 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 CXCL8P10145 99 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 HARSP12081 509 aaKnown RBP14.13□□□□□ -0.15
VRK3-203ENST00000424804 EPHA5P54756 1037 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SPAG1Q07617 926 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 MCM6Q14566 821 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms