RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 A6NHS1 94 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 RASA4BC9J798 803 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 DNALI1O14645 258 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 ALOX15BO15296 676 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 RASA4O43374 803 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 EDF1O60869 148 aaKnown RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 SMNDC1O75940 238 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 RPSAP08865 295 aaKnown RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CETPP11597 493 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 TSHRP16473 764 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CALB2P22676 271 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CALRP27797 417 aaKnown RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 SFNP31947 248 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 JAK3P52333 1124 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 MCL1Q07820 350 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CYP24A1Q07973 514 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 GRIK3Q13003 919 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 MORF4L2Q15014 288 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 KCTD19Q17RG1 926 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CC2D2BQ6DHV5 1058 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 MON1BQ7L1V2 547 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 RCOR2Q8IZ40 523 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 TMEM161BQ8NDZ6 487 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 THOC1Q96FV9 657 aaKnown RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 OSBPL8Q9BZF1 889 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 LNPEPQ9UIQ6 1025 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 SCINQ9Y6U3 715 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 TISP43B9A030 160 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 H0YCG3 227 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 PPP1R12AO14974 1030 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 ONECUT3O60422 494 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 GH1P01241 217 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 CNGA1P29973 690 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 PSMC5P62195 406 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 SNX1Q13596 522 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 ANKRD20A2Q5SQ80 823 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 ANKRD20A1Q5TYW2 823 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 ANKRD20A3Q5VUR7 823 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 SV2AQ7L0J3 742 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 CBWD2Q8IUF1 395 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 SRRM1Q8IYB3 904 aaKnown RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 UTP4Q969X6 686 aaKnown RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 LRRC37BQ96QE4 947 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 FRMD8P1Q9BZ68 369 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-204ENST00000424143 ETNK1Q9HBU6 452 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 CYLDQ9NQC7 956 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 CNTN6Q9UQ52 1028 aa16.15■□□□□ 0.18
C9orf3-204ENST00000424143 C2CD2LO14523 706 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 TBC1D12O60347 775 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 FDX1P10109 184 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 RALAP11233 206 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 RRM1P23921 792 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 CBLBQ13191 982 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 CCDC174Q6PII3 467 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 ERICH1Q86X53 443 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 GDAP1Q8TB36 358 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 TAS1R2Q8TE23 839 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 RBM41Q96IZ5 413 aaKnown RBP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 RBM15Q96T37 977 aaKnown RBP eCLIP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 SENP7Q9BQF6 1050 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 HERPUD2Q9BSE4 406 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 MYLK2Q9H1R3 596 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
C9orf3-204ENST00000424143 CHORDC1Q9UHD1 332 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 R3HDM2Q9Y2K5 976 aaKnown RBP16.14■□□□□ 0.17
C9orf3-204ENST00000424143 ASTN2O75129 1339 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-204ENST00000424143 SMAPO00193 183 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 ZWINTO95229 277 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 ICAM1P05362 532 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 GCAP28676 217 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 PTGER2P43116 358 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 NSFP46459 744 aaKnown RBP16.13■□□□□ 0.17
C9orf3-204ENST00000424143 CACNB3P54284 484 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 EAPPQ56P03 285 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-204ENST00000424143 BRDTQ58F21 947 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-204ENST00000424143 SLC30A10Q6XR72 485 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 KIAA0825Q8IV33 1275 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 KIF2BQ8N4N8 673 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 STK32AQ8WU08 396 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 ATG4AQ8WYN0 398 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 PHTF1Q9UMS5 762 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 SHOC2Q9UQ13 582 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 CHKBQ9Y259 395 aa16.13■□□□□ 0.17
C9orf3-204ENST00000424143 EXOC1LA0A1B0GW35 172 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SLC16A4O15374 487 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 TYROBPO43914 113 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ECE2O60344 883 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms