RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CYP46A1Q9Y6A2 500 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ABCC12Q96J65 1359 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 POTEFA5A3E0 1075 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ESPNB1AK53 854 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MTSS1O43312 755 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CSF2RAP15509 400 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RPS15P62841 145 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 NR5A1Q13285 461 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SEPT2Q15019 361 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DUOXA1Q1HG43 343 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FAM171A1Q5VUB5 890 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SLFN12LQ6IEE8 588 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 BLOC1S2Q6QNY1 142 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF574Q6ZN55 896 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FRMD5Q7Z6J6 570 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FAM35AQ86V20 835 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CCDC65Q8IXS2 484 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LIX1Q8N485 282 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LSM14AQ8ND56 463 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 HNRNPLLQ8WVV9 542 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EDAQ92838 391 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 GREM2Q9H772 168 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 VCPKMTQ9H867 229 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ECT2Q9H8V3 914 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SLC9A2Q9UBY0 812 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SCAF8Q9UPN6 1271 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TTLL3Q9Y4R7 772 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 BECN2A8MW95 431 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CRYBA1P05813 215 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 OR52Z1P0C646 297 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 HSPA4P34932 840 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CCR10P46092 362 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SLC11A2P49281 568 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TMPRSS3P57727 454 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CYP27A1Q02318 531 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MTA1Q13330 715 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 PDGFRLQ15198 375 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EPC2Q52LR7 807 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ALKBH2Q6NS38 261 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LUZP1Q86V48 1076 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 OR6B3Q8NGW1 331 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DEPDC1BQ8WUY9 529 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 POF1BQ8WVV4 589 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 IFT81Q8WYA0 676 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CELF1Q92879 486 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ARHGEF26Q96DR7 871 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SGSM3Q96HU1 749 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CLSTN3Q9BQT9 956 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CLMPQ9H6B4 373 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FAM114A2Q9NRY5 505 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TXLNGQ9NUQ3 528 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 WDR35Q9P2L0 1181 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DEC1Q9P2X7 70 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EIF3LQ9Y262 564 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MYH3P11055 1940 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MKRN2OSH3BPM6 223 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 KLHL18O94889 574 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 KRT20P35900 424 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CPA2P48052 419 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SLC26A2P50443 739 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CDR1P51861 262 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MRPS6P82932 125 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EXOSC9Q06265 439 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 PSMD6Q15008 389 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ANGPT1Q15389 498 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 NFE2Q16621 373 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LIPNQ5VXI9 398 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TMCO3Q6UWJ1 677 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FAM124AQ86V42 546 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RAB43Q86YS6 212 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SYTL1Q8IYJ3 562 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SAMD3Q8N6K7 520 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SEC14L1Q92503 715 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EVI5LQ96CN4 794 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TBC1D31Q96DN5 1066 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CLMNQ96JQ2 1002 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TBC1D32Q96NH3 1257 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 BBS4Q96RK4 519 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ADAM2Q99965 735 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MCCC2Q9HCC0 563 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FBRSL1Q9HCM7 1045 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 OSGEPQ9NPF4 335 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 GDAQ9Y2T3 454 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LCTP09848 1927 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MACROD2A1Z1Q3 448 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 FAM171A2A8MVW0 826 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 hCG_1984214I3L0E3 225 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 UBXN8O00124 270 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CRCPO75575 148 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RALBP11234 206 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 XRCC5P13010 732 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 KRT5P13647 590 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DDX5P17844 614 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 INPP5BP32019 993 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 VPS41P49754 854 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RPP38P78345 283 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 PLGLB1Q02325 96 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SF3B3Q15393 1217 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms