RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 MICAL2O94851 1124 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 LRG1P02750 347 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 MCM4P33991 863 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 TNFSF9P41273 254 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
VARS2-202ENST00000421263 CUL4AQ13619 759 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 SF3A1Q15459 793 aaKnown RBP20.6■□□□□ 0.89
VARS2-202ENST00000421263 KYAT1Q16773 422 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 CTXN3Q4LDR2 81 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 PRSS36Q5K4E3 855 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 GPBP1Q86WP2 473 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 APPL2Q8NEU8 664 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 RAD54LQ92698 747 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 SHDQ96IW2 340 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 TSPAN18Q96SJ8 248 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 DDX23Q9BUQ8 820 aaKnown RBP20.6■□□□□ 0.89
VARS2-202ENST00000421263 CYP4F11Q9HBI6 524 aa20.6■□□□□ 0.89
VARS2-202ENST00000421263 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
VARS2-202ENST00000421263 LACTBL1A8MY62 500 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 PRRG1O14668 218 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 TRAK2O60296 914 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 ECI2O75521 394 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 OAZ2O95190 189 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 ARPP19P56211 112 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 MCM6Q14566 821 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 SLC44A4Q53GD3 710 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 ZNF280DQ6N043 979 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 TMEM130Q8N3G9 435 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 BEST2Q8NFU1 509 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 NKD2Q969F2 451 aaPredicted RBP20.59■□□□□ 0.89
VARS2-202ENST00000421263 MCRS1Q96EZ8 462 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 CCSER1Q9C0I3 900 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 PARVGQ9HBI0 331 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 AFF4Q9UHB7 1163 aaKnown RBP20.59■□□□□ 0.89
VARS2-202ENST00000421263 INSL5Q9Y5Q6 135 aa20.59■□□□□ 0.89
VARS2-202ENST00000421263 PTPRZ1P23471 2315 aaPredicted RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 RIF1Q5UIP0 2472 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 A0A0B4J269 797 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 OGTO15294 1046 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 DCNP07585 359 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 GLULP15104 373 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 PLCG1P19174 1290 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 RFX1P22670 979 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 MARCKSP29966 332 aaPredicted RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 MATR3P43243 847 aaKnown RBP eCLIP20.58■□□□□ 0.89
VARS2-202ENST00000421263 LIG4P49917 911 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 GTF2BQ00403 316 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 PRKCQQ04759 706 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 SPAG1Q07617 926 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 SNW1Q13573 536 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 DHX8Q14562 1220 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 KARSQ15046 597 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 ENOX2Q16206 610 aaKnown RBP20.58■□□□□ 0.89
VARS2-202ENST00000421263 PJA1Q8NG27 643 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 ING5Q8WYH8 240 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 KIF12Q96FN5 646 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 BICD1Q96G01 975 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 KXD1Q9BQD3 176 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 PLA2G2FQ9BZM2 168 aa20.58■□□□□ 0.89
VARS2-202ENST00000421263 KANSL1LA0AUZ9 987 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 FAM13AO94988 1023 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 DDIT3P35638 169 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 PFKPQ01813 784 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 ZBTB41Q5SVQ8 909 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 SLC39A4Q6P5W5 647 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 CD302Q8IX05 232 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 OXCT2Q9BYC2 517 aaPredicted RBP20.57■□□□□ 0.88
VARS2-202ENST00000421263 FOXQ1Q9C009 403 aa20.57■□□□□ 0.88
VARS2-202ENST00000421263 CPSF3Q9UKF6 684 aaKnown RBP20.57■□□□□ 0.88
VARS2-202ENST00000421263 K7ENM7 598 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 ZNF197O14709 1029 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 HNRNPDLO14979 420 aaKnown RBP20.56■□□□□ 0.88
VARS2-202ENST00000421263 CEBPBP17676 345 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 ABCD1P33897 745 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 CCR2P41597 374 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 YWHAHQ04917 246 aaPredicted RBP20.56■□□□□ 0.88
VARS2-202ENST00000421263 PPP2R3AQ06190 1150 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 ADCY1Q08828 1119 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 PTPAQ15257 358 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 MLF2Q15773 248 aaPredicted RBP20.56■□□□□ 0.88
VARS2-202ENST00000421263 SPATA1Q5VX52 437 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 TANGO2Q6ICL3 276 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 RNF19BQ6ZMZ0 732 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 MAP4K3Q8IVH8 894 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 LARP4BQ92615 738 aaKnown RBP20.56■□□□□ 0.88
VARS2-202ENST00000421263 ELSPBP1Q96BH3 223 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 TCEAL4Q96EI5 215 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 CORO1BQ9BR76 489 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 OSBPL6Q9BZF3 934 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 ST6GALNAC4Q9H4F1 302 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 RPF1Q9H9Y2 349 aaKnown RBP20.56■□□□□ 0.88
VARS2-202ENST00000421263 CEP72Q9P209 647 aa20.56■□□□□ 0.88
VARS2-202ENST00000421263 XPOTO43592 962 aaKnown RBP20.55■□□□□ 0.88
VARS2-202ENST00000421263 MOSPD3O75425 235 aa20.55■□□□□ 0.88
VARS2-202ENST00000421263 VNN2O95498 520 aa20.55■□□□□ 0.88
VARS2-202ENST00000421263 FCARP24071 287 aa20.55■□□□□ 0.88
VARS2-202ENST00000421263 NMT1P30419 496 aaKnown RBP20.55■□□□□ 0.88
VARS2-202ENST00000421263 EPHA5P54756 1037 aa20.55■□□□□ 0.88
VARS2-202ENST00000421263 SPECC1Q5M775 1068 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms