RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TSPY1Q01534 308 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 RUNX1T1Q06455 604 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 PDAP1Q13442 181 aaKnown RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 PDIA5Q14554 519 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 LAYNQ6UX15 382 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 CYFIP1Q7L576 1253 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 RRM2BQ7LG56 351 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 CNDP1Q96KN2 507 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 SP110Q9HB58 689 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 ALG6Q9Y672 507 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 CCNA1P78396 465 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 KIAA1841Q6NSI8 718 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 TAS2R42Q7RTR8 314 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 STX19Q8N4C7 294 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.34
CLCN4-203ENST00000421085 EYA4O95677 639 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 MICU2Q8IYU8 434 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PPHLN1Q8NEY8 458 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PABPC3Q9H361 631 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 E7ENQ6 273 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 TMEM253P0C7T8 217 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 KRT76Q01546 638 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 SWSAP1Q6NVH7 229 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 NLRP9Q7RTR0 991 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 GABBR1Q9UBS5 961 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 V9GYQ6 96 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 ATP10AO60312 1499 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 USP6P35125 1406 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 CPDO75976 1380 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PRUNE1Q86TP1 453 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 ELMO2Q96JJ3 720 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 MAGEB18Q96M61 343 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 ADAMTS12P58397 1594 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 CCDC78A2IDD5 438 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PLEKP08567 350 aaPredicted RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 NUDT2P50583 147 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 KCNQ4P56696 695 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 CEP78Q5JTW2 689 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 GIMAP8Q8ND71 665 aaPredicted RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 VPS50Q96JG6 964 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 GRID1Q9ULK0 1009 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PCDHGB4Q9UN71 923 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 COPG1Q9Y678 874 aaKnown RBP12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 LCP1P13796 627 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 HLFQ16534 295 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 PPP4R4Q6NUP7 873 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
CLCN4-203ENST00000421085 MYMKA6NI61 221 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 ZBTB39O15060 712 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 CACNB3P54284 484 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 KCNMA1Q12791 1236 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 FAM162AQ96A26 154 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 KLHL25Q9H0H3 589 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 DCLRE1BQ9H816 532 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 CAB39Q9Y376 341 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 CDY2AQ9Y6F7 541 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 CDY1Q9Y6F8 540 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 APBA3O96018 575 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 HMOX2P30519 316 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SF3B3Q15393 1217 aaKnown RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 C18orf8Q96DM3 657 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 PHKA2P46019 1235 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SIKE1Q9BRV8 207 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 LZTS3O60299 673 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 ATP9AO75110 1047 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 ALBP02768 609 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 PAX7P23759 505 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 LTKP29376 864 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SFNP31947 248 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms