RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PI4K2AQ9BTU6 479 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PARVAQ9NVD7 372 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PTPRJQ12913 1337 aa15.52■□□□□ 0.07
HLA-DPA1-242ENST00000419277 THAP12O43422 761 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SHOX2O60902 331 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PGK2P07205 417 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TMEM191BP0C7N4 346 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MCF2P10911 925 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 CAPN2P17655 700 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ACTN2P35609 894 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LMAN1P49257 510 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TRPC3Q13507 836 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZNF792Q3KQV3 632 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZNF568Q3ZCX4 644 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 DUPD1Q68J44 220 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PLEKHA7Q6IQ23 1121 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TMEM270Q6UE05 265 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZBTB45Q96K62 511 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LRRC19Q9H756 370 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MTRF1LQ9UGC7 380 aaKnown RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 STRIP2Q9ULQ0 834 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PCDHGC3Q9UN70 934 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PASKQ96RG2 1323 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ESYT3A0FGR9 886 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 NDC80O14777 642 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TTI1O43156 1089 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZEB2O60315 1214 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PROSCO94903 275 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 C22orf31O95567 290 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 HOXD8P13378 290 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ATICP31939 592 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 CDH5P33151 784 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 Q3C1V9 767 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 EEPD1Q7L9B9 569 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 GDAP1L1Q96MZ0 367 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZIM3Q96PE6 472 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ASB7Q9H672 318 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 VRTNQ9H8Y1 702 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 APOBEC3GQ9HC16 384 aaKnown RBP15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SLC5A4Q9NY91 659 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ADAM22Q9P0K1 906 aa15.51■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZSCAN5CA6NGD5 496 aaPredicted RBP15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 FSCN2O14926 492 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MED7O43513 233 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PPFIA4O75335 1185 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ITGA4P13612 1032 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 P4HA1P13674 534 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 YBX3P16989 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SKOR1P84550 965 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MBTD1Q05BQ5 628 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LRRC38Q5VT99 294 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 WDR78Q5VTH9 848 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 EFCAB12Q6NXP0 572 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 JAMLQ86YT9 394 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TSEN2Q8NCE0 465 aaKnown RBP15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TMEM35BQ8NCS4 154 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PARK7Q99497 189 aaKnown RBP15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 IP6K2Q9UHH9 426 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 NUB1Q9Y5A7 615 aa15.5■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PPFIA2O75334 1257 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LGALS2P05162 132 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MMP8P22894 467 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MARK3P27448 753 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 GSCP56915 257 aaPredicted RBP15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 NAA35Q5VZE5 725 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 CEP128Q6ZU80 1094 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 TMC3Q7Z5M5 1100 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZNF410Q86VK4 478 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 OR5B17Q8NGF7 314 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 KRT35Q92764 455 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MAGOHBQ96A72 148 aaKnown RBP15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 RPF1Q9H9Y2 349 aaKnown RBP15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MROH7Q68CQ1 1323 aa15.49■□□□□ 0.07
HLA-DPA1-242ENST00000419277 INO80B-WBP1J3KQ70 363 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 DAPK3O43293 454 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 STAU1O95793 577 aaKnown RBP15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 GAS8O95995 478 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 EDN1P05305 212 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 PAEPP09466 180 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 MYZAPP0CAP1 466 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 RRM1P23921 792 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 POLR2BP30876 1174 aaKnown RBP15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 CAV1Q03135 178 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 DRP2Q13474 957 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 SLMAPQ14BN4 828 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 FAM110CQ1W6H9 321 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 ZNF699Q32M78 642 aa15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 LMBRD2Q68DH5 695 aaPredicted RBP15.48■□□□□ 0.07
HLA-DPA1-242ENST00000419277 CCDC137Q6PK04 289 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms