RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RASA4O43374 803 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ZBED4O75132 1171 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 TTC4O95801 387 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 SMTNL2Q2TAL5 461 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ACCSLQ4AC99 568 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 DPH6Q7L8W6 267 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ANKMY2Q8IV38 441 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ECT2Q9H8V3 914 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 APOBEC3GQ9HC16 384 aaKnown RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 SNX3O60493 162 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 HMGCS2P54868 508 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 KRT76Q01546 638 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CXCL9Q07325 125 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CLUL1Q15846 466 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CYP1B1Q16678 543 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 C12orf56Q8IXR9 622 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 RMDN2Q96LZ7 410 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 RBM15Q96T37 977 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 UNGP13051 313 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KRT15P19012 456 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 JAK3P52333 1124 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 FSTL1Q12841 308 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 DNAJC3Q13217 504 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 NOD2Q9HC29 1040 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 RBAKQ9NYW8 714 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 FBXO40Q9UH90 709 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 GJA3Q9Y6H8 435 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KRT1P04264 644 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 IVDP26440 423 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 DRP2Q13474 957 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 N4BP2L2Q92802 583 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KLF6Q99612 283 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 MARK3P27448 753 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 NOP14P78316 857 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 STRN3Q13033 797 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 GPS1Q13098 491 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 TRMT10CQ7L0Y3 403 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 ALG13Q9NP73 1137 aaKnown RBP12.63□□□□□ -0.39
LIMK1-202ENST00000418310 SLCO1B3Q9NPD5 702 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 PCDHB2Q9Y5E7 798 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
LIMK1-202ENST00000418310 F8VP50 259 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 GOLGA8RI6L899 631 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 MTA2O94776 668 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 FDX1P10109 184 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 ITIH2P19823 946 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 NRLP54845 237 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 ACTR2P61160 394 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 GAD2Q05329 585 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 MYO1EQ12965 1108 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-202ENST00000418310 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 USP37Q86T82 979 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 CENPTQ96BT3 561 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 GMLQ99445 158 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 CYP26B1Q9NR63 512 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 LRRD1A4D1F6 860 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 ASAP2O43150 1006 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 WEE2P0C1S8 567 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 DPEP1P16444 411 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 MFSD7Q6UXD7 560 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 C3orf20Q8ND61 904 aa12.62□□□□□ -0.39
LIMK1-202ENST00000418310 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms