RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 SCARA3Q6AZY7 606 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 PPFIBP1Q86W92 1011 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 TSPAN18Q96SJ8 248 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 CLSTN3Q9BQT9 956 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 FNIP2Q9P278 1114 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 DERAQ9Y315 318 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 C2CD2Q9Y426 696 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 ANK1P16157 1881 aa20.71■□□□□ 0.91
CCDC148-204ENST00000417066 DLL1O00548 723 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 IL18RAPO95256 599 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 PUS10Q3MIT2 529 aaKnown RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 C9orf57Q5W0N0 161 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 RSPO2Q6UXX9 243 aaPredicted RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 GPR65Q8IYL9 337 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 FBXL18Q96ME1 805 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 UHRF1Q96T88 793 aaPredicted RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 DPP3Q9NY33 737 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 USP15Q9Y4E8 981 aaPredicted RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 TTC28Q96AY4 2481 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 ZNF233A6NK53 670 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 KIAA0391O15091 583 aaKnown RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 WEE2P0C1S8 567 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 TFAMQ00059 246 aaKnown RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 LMBRD2Q68DH5 695 aaPredicted RBP20.7■□□□□ 0.9
CCDC148-204ENST00000417066 HS2ST1Q7LGA3 356 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 SUSD3Q96L08 255 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 KCTD10Q9H3F6 313 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
CCDC148-204ENST00000417066 C5orf42Q9H799 3197 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 SPTLC1O15269 473 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 TGM5O43548 720 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 GLUD1P00367 558 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 HOXB8P17481 243 aaPredicted RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 KCNB1Q14721 858 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 SMAD2Q15796 467 aaKnown RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 VARS2Q5ST30 1063 aaKnown RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 RARS2Q5T160 578 aaKnown RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 CCDC47Q96A33 483 aaKnown RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 MAN1C1Q9NR34 630 aa20.69■□□□□ 0.9
CCDC148-204ENST00000417066 TIMM13Q9Y5L4 95 aaPredicted RBP20.69■□□□□ 0.9
CCDC148-204ENST00000417066 ANO9A1A5B4 782 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 PIRO00625 290 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 OR1D2P34982 312 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 AARSP49588 968 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCDC148-204ENST00000417066 LILRA4P59901 499 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 SNRPFP62306 86 aaKnown RBP20.68■□□□□ 0.9
CCDC148-204ENST00000417066 SNRNP35Q16560 246 aaKnown RBP20.68■□□□□ 0.9
CCDC148-204ENST00000417066 LILRA6Q6PI73 481 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 TMC5Q6UXY8 1006 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 SMYD4Q8IYR2 804 aaPredicted RBP20.68■□□□□ 0.9
CCDC148-204ENST00000417066 XXYLT1Q8NBI6 393 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 TIGD1Q96MW7 591 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 CD320Q9NPF0 282 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 MTRRQ9UBK8 725 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 PCDHA5Q9Y5H7 936 aa20.68■□□□□ 0.9
CCDC148-204ENST00000417066 PTPRJQ12913 1337 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 SYN3O14994 580 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 CREMQ03060 361 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 DSTYKQ6XUX3 929 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 ANKS3Q6ZW76 656 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 C12orf56Q8IXR9 622 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 C1orf127Q8N9H9 656 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 SUSD6Q92537 303 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 ADAM7Q9H2U9 754 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 KIAA1586Q9HCI6 787 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 DZANK1Q9NVP4 752 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 PCDHB8Q9UN66 801 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 FAM50BQ9Y247 325 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.67■□□□□ 0.9
CCDC148-204ENST00000417066 CDY1Q9Y6F8 540 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 PLXNA3P51805 1871 aa20.67■□□□□ 0.9
CCDC148-204ENST00000417066 M0QZQ0 153 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 PRPF40AO75400 957 aaKnown RBP20.66■□□□□ 0.9
CCDC148-204ENST00000417066 MRPL58Q14197 206 aaKnown RBP20.66■□□□□ 0.9
CCDC148-204ENST00000417066 PDXDC1Q6P996 788 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 NT5DC4Q86YG4 428 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 OR5B17Q8NGF7 314 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 IPO9Q96P70 1041 aaKnown RBP20.66■□□□□ 0.9
CCDC148-204ENST00000417066 POP1Q99575 1024 aaKnown RBP20.66■□□□□ 0.9
CCDC148-204ENST00000417066 MTMR12Q9C0I1 747 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 CGNQ9P2M7 1197 aaKnown RBP20.66■□□□□ 0.9
CCDC148-204ENST00000417066 SCN1AP35498 2009 aa20.66■□□□□ 0.9
CCDC148-204ENST00000417066 EXOC3O60645 756 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 RFPL2O75678 378 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 ITGB3P05106 788 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 POLR2BP30876 1174 aaKnown RBP20.65■□□□□ 0.9
CCDC148-204ENST00000417066 CYP24A1Q07973 514 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 KREMEN2Q8NCW0 462 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 CXorf38Q8TB03 319 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 CACTINQ8WUQ7 758 aaKnown RBP20.65■□□□□ 0.9
CCDC148-204ENST00000417066 CCDC127Q96BQ5 260 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 SENP8Q96LD8 212 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 DMAC2Q9NW81 257 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 AGAP1Q9UPQ3 857 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 BACE2Q9Y5Z0 518 aa20.65■□□□□ 0.9
CCDC148-204ENST00000417066 MUC3AQ02505 3323 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms