RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ACAD11Q709F0 780 aa13.58□□□□□ -0.23
SCN1B-202ENST00000415950 RUBCNQ92622 972 aa13.58□□□□□ -0.23
SCN1B-202ENST00000415950 NARFQ9UHQ1 456 aa13.58□□□□□ -0.23
SCN1B-202ENST00000415950 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.23
SCN1B-202ENST00000415950 GRAP2O75791 330 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 PSAPP07602 524 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 XPAP23025 273 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 CASP5P51878 434 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 STAT4Q14765 748 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 RCN1Q15293 331 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 KLC3Q6P597 504 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ICA1LQ8NDH6 482 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 TRAPPC3O43617 180 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 LGR5O75473 907 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 APRTP07741 180 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ALDH5A1P51649 535 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 SESN2P58004 480 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 OCA2Q04671 838 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 TEKT4Q8WW24 435 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 UBE4BO95155 1302 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 CHEK2O96017 543 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ITIH2P19823 946 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 RPA1P27694 616 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 RPL21P46778 160 aaKnown RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ZNF699Q32M78 642 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 CDR2LQ86X02 465 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 ATP11CQ8NB49 1132 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 PDCD6IPQ8WUM4 868 aaKnown RBP13.58□□□□□ -0.24
SCN1B-202ENST00000415950 TTC25Q96NG3 672 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 PHTF1Q9UMS5 762 aa13.58□□□□□ -0.24
SCN1B-202ENST00000415950 NEMP1O14524 444 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CBX6O95503 412 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CDK17Q00537 523 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SARS2Q9NP81 518 aaKnown RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 AGPAT3Q9NRZ7 376 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 TAS2R14Q9NYV8 317 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SCHIP1Q9P0W5 487 aaPredicted RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CAV1Q03135 178 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 FBXO28Q9NVF7 368 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 HEY2Q9UBP5 337 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 PYGMP11217 842 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 NPR1P16066 1061 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CDH6P55285 790 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SKOR1P84550 965 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 NFIAQ12857 509 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 ITGB3BPQ13352 177 aaPredicted RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 PPP1R2P3Q6NXS1 205 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 KDELC2Q7Z4H8 507 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 PRUNE1Q86TP1 453 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 ACTRT1Q8TDG2 376 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 AGAP11Q8TF27 550 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 ZSWIM1Q9BR11 485 aa13.57□□□□□ -0.24
SCN1B-202ENST00000415950 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
SCN1B-202ENST00000415950 TISP43B9A030 160 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ADAMTS3O15072 1205 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 DEUP1Q05D60 604 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 GIT2Q14161 759 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 IQCKQ8N0W5 287 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 OR6P1Q8NGX9 317 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 KAT5Q92993 513 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 DHX35Q9H5Z1 703 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 BATF3Q9NR55 127 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 AURKCQ9UQB9 309 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ATP6V1B1P15313 513 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 TCN1P20061 433 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SDC4P31431 198 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 COBLL1Q53SF7 1204 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 NLGN1Q8N2Q7 840 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 STX18Q9P2W9 335 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 PNMA3Q9UL41 463 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 PFASO15067 1338 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ATP9BO43861 1147 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 MARCKSL1P49006 195 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SLC47A2Q86VL8 602 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms