RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 AMY2AP04746 511 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 CKMP06732 381 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 CA3P07451 260 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 ADRB1P08588 477 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 FAHP16930 419 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 AMY2BP19961 511 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 CNGA1P29973 690 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 PABPC4Q13310 644 aaKnown RBP eCLIP6.33□□□□□ -1.4
CSTF1-202ENST00000415828 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 EPHA10Q5JZY3 1008 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 ZFYVE27Q5T4F4 411 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 TTLL11Q8NHH1 800 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
CSTF1-202ENST00000415828 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 TNPO3Q9Y5L0 923 aaKnown RBP6.33□□□□□ -1.4
CSTF1-202ENST00000415828 DUSP10Q9Y6W6 482 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 RELNP78509 3460 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 TICRRQ7Z2Z1 1910 aa6.33□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF536O15090 1300 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF521Q96K83 1311 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 TIMP1P01033 207 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ANXA1P04083 346 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 PTPN1P18031 435 aaKnown RBP6.32□□□□□ -1.4
CSTF1-202ENST00000415828 SDSP20132 328 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 THBS2P35442 1172 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 IGFALSP35858 605 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 EPHA5P54756 1037 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 GJA9P57773 515 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 TNFAIP1Q13829 316 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF460Q14592 562 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 PROSER3Q2NL68 480 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 TREML2Q5T2D2 321 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 PHF19Q5T6S3 580 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ABHD17CQ6PCB6 329 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 NOP9Q86U38 636 aaKnown RBP6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ADHFE1Q8IWW8 467 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 USP6NLQ92738 828 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 CLIC6Q96NY7 704 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
CSTF1-202ENST00000415828 COA1Q9GZY4 146 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 MIS18AQ9NYP9 233 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 ABCA12Q86UK0 2595 aa6.32□□□□□ -1.4
CSTF1-202ENST00000415828 KBTBD13C9JR72 458 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 SCDO00767 359 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
CSTF1-202ENST00000415828 SLC5A1P13866 664 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 GLRBP48167 497 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 ADAM9Q13443 819 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 TKFCQ3LXA3 575 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 CPZQ66K79 652 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 MFSD5Q6N075 450 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF761Q86XN6 746 aaPredicted RBP6.31□□□□□ -1.4
CSTF1-202ENST00000415828 DCLK2Q8N568 766 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 GDPD5Q8WTR4 605 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 SAMD15Q9P1V8 674 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.31□□□□□ -1.4
CSTF1-202ENST00000415828 WASF3Q9UPY6 502 aa6.31□□□□□ -1.4
CSTF1-202ENST00000415828 RALGAPA1Q6GYQ0 2036 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 TRIP12Q14669 1992 aaPredicted RBP6.3□□□□□ -1.4
CSTF1-202ENST00000415828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.3□□□□□ -1.4
CSTF1-202ENST00000415828 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 FAM90A27PA6NNH2 459 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 B4E1Z4 1266 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 M0R2C6 588 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ACOT7O00154 380 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ASLP04424 464 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ARP10275 920 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 CNR2P34972 360 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ZXDAP98168 799 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 PPIGQ13427 754 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSTF1-202ENST00000415828 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ZCCHC8Q6NZY4 707 aaKnown RBP6.3□□□□□ -1.4
CSTF1-202ENST00000415828 OVCH1Q7RTY7 1134 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 SYNPOQ8N3V7 929 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 ADAMTS17Q8TE56 1095 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
CSTF1-202ENST00000415828 MYBBP1AQ9BQG0 1328 aaKnown RBP6.29□□□□□ -1.4
CSTF1-202ENST00000415828 SLC12A8A0AV02 714 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 DDX3XO00571 662 aaKnown RBP eCLIP6.29□□□□□ -1.42e-7■■□□□ 13.3
CSTF1-202ENST00000415828 CXCL11O14625 94 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 ENO2P09104 434 aaPredicted RBP6.29□□□□□ -1.4
CSTF1-202ENST00000415828 JMJD7P0C870 316 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
CSTF1-202ENST00000415828 FLT3P36888 993 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 CCT4P50991 539 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms