RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 URGCPQ8TCY9 931 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 DDX27Q96GQ7 796 aaKnown RBP14.32□□□□□ -0.12
CNN3-203ENST00000415017 NAA15Q9BXJ9 866 aaKnown RBP14.32□□□□□ -0.12
CNN3-203ENST00000415017 GANQ9H2C0 597 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 NRDE2Q9H7Z3 1164 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 DAAM1Q9Y4D1 1078 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 VWA8A3KMH1 1905 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 H0YGN5 161 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 PPEF2O14830 753 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 ADCY5O95622 1261 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 MYL6P60660 151 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 RBP5P82980 135 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 CETN1Q12798 172 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 SYCP1Q15431 976 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 SHHQ15465 462 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 SGSM1Q2NKQ1 1148 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 PHLDB3Q6NSJ2 640 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.31□□□□□ -0.12
CNN3-203ENST00000415017 TMCO2Q7Z6W1 182 aaPredicted RBP14.31□□□□□ -0.12
CNN3-203ENST00000415017 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 PDLIM2Q96JY6 352 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 TMEM175Q9BSA9 504 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 INTS2Q9H0H0 1204 aaKnown RBP14.31□□□□□ -0.12
CNN3-203ENST00000415017 GOLGA2P5Q9HBQ8 144 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 APOBEC3GQ9HC16 384 aaKnown RBP14.31□□□□□ -0.12
CNN3-203ENST00000415017 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 GCNT4Q9P109 453 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 SLC4A7Q9Y6M7 1214 aa14.31□□□□□ -0.12
CNN3-203ENST00000415017 TBKBP1A7MCY6 615 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 UPP2O95045 317 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 TPM3P06753 285 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 IGFBP6P24592 240 aaPredicted RBP14.3□□□□□ -0.12
CNN3-203ENST00000415017 POLR2BP30876 1174 aaKnown RBP14.3□□□□□ -0.12
CNN3-203ENST00000415017 KLK7P49862 253 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 CLCNKBP51801 687 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 GCNT1Q02742 428 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 ARID5BQ14865 1188 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 KLHDC7AQ5VTJ3 777 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 DCLRE1AQ6PJP8 1040 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 LRRC43Q8N309 656 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 UBR7Q8N806 425 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 JAKMIP2Q96AA8 810 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 PAAF1Q9BRP4 392 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 CRACR2AQ9BSW2 395 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 EDEM3Q9BZQ6 932 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
CNN3-203ENST00000415017 FAM124BQ9H5Z6 455 aaPredicted RBP14.3□□□□□ -0.12
CNN3-203ENST00000415017 MMRN2Q9H8L6 949 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 APEX2Q9UBZ4 518 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 DNAJB4Q9UDY4 337 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 AGAP1Q9UPQ3 857 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 INPP5FQ9Y2H2 1132 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 NUB1Q9Y5A7 615 aa14.3□□□□□ -0.12
CNN3-203ENST00000415017 A0A1W2PQJ5 194 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 PODXLO00592 558 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 EPHB6O15197 1021 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 SPTLC1O15269 473 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 FAM163BP0C2L3 166 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
CNN3-203ENST00000415017 RFX1P22670 979 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 PNPLA4P41247 253 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 LILRA4P59901 499 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 BIRC3Q13489 604 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 CLP1Q92989 425 aaKnown RBP14.29□□□□□ -0.12
CNN3-203ENST00000415017 IQCDQ96DY2 449 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 RAD9AQ99638 391 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 BCO2Q9BYV7 579 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 INSL6Q9Y581 213 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 TRANK1O15050 2925 aa14.29□□□□□ -0.12
CNN3-203ENST00000415017 CARNS1A5YM72 827 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 ZBBXA8MT70 800 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 M0QZQ0 153 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 PHACTR2O75167 634 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 GALTP07902 379 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 UCHL3P15374 230 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 PIK3CAP42336 1068 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 ASPAP45381 313 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 APBA1Q02410 837 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 TRPC3Q13507 836 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 PTPN21Q16825 1174 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 ARHGEF19Q8IW93 802 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 RNF168Q8IYW5 571 aaPredicted RBP14.28□□□□□ -0.12
CNN3-203ENST00000415017 BAP1Q92560 729 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 TATDN2Q93075 761 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 GPR88Q9GZN0 384 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 PLXNA4Q9HCM2 1894 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 MARCH5Q9NX47 278 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 CHD7Q9P2D1 2997 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 CNTN6Q9UQ52 1028 aa14.28□□□□□ -0.12
CNN3-203ENST00000415017 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.13
CNN3-203ENST00000415017 KPNA7A9QM74 516 aa14.27□□□□□ -0.13
CNN3-203ENST00000415017 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms