RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 I3L4J1 428 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 SGSM2O43147 1006 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
CPNE1-208ENST00000414711 CHMLP26374 656 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 RDXP35241 583 aaKnown RBP17.43■□□□□ 0.38
CPNE1-208ENST00000414711 ARPP19P56211 112 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 IRX4P78413 519 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 C19orf57Q0VDD7 668 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 Q4G0T1 1027 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 PMS2CLQ68D20 193 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 BICD2Q8TD16 824 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 CXCL16Q9H2A7 254 aa17.43■□□□□ 0.38
CPNE1-208ENST00000414711 WRAP73Q9P2S5 460 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-208ENST00000414711 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 GOLGA8BA8MQT2 603 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 TRAPPC3O43617 180 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 RECQL4O94761 1208 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
CPNE1-208ENST00000414711 TNK2Q07912 1038 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 TWF1Q12792 350 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 GRSF1Q12849 480 aaKnown RBP eCLIP17.42■□□□□ 0.383e-10■□□□□ 10.9
CPNE1-208ENST00000414711 CAPSQ13938 189 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 FSTL4Q6MZW2 842 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 ETNPPLQ8TBG4 499 aa17.42■□□□□ 0.38
CPNE1-208ENST00000414711 PCNX2A6NKB5 2137 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 CCDC194A0A1B0GVG4 234 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 EML1O00423 815 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-208ENST00000414711 RNF40O75150 1001 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 TDP2O95551 362 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 APBB3O95704 486 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 CDC27P30260 824 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 YWHABP31946 246 aaKnown RBP17.41■□□□□ 0.38
CPNE1-208ENST00000414711 POU5F1BQ06416 359 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 LMAN2Q12907 356 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 TMEM196Q5HYL7 178 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 RAB44Q7Z6P3 723 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-208ENST00000414711 PIP4P1Q86T03 277 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 GPIHBP1Q8IV16 184 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 ASAP3Q8TDY4 903 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 CCDC86Q9H6F5 360 aaKnown RBP17.41■□□□□ 0.38
CPNE1-208ENST00000414711 XPNPEP1Q9NQW7 623 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 ARID2Q68CP9 1835 aa17.41■□□□□ 0.38
CPNE1-208ENST00000414711 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 DPYSL4O14531 572 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 TBX3O15119 743 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 MAPK8P45983 427 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 BRCC3P46736 316 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 CLCNKBP51801 687 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 ITPRIPL2Q3MIP1 535 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 STXBP5Q5T5C0 1151 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 TPGS2Q68CL5 300 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 CD300LGQ6UXG3 332 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 C11orf74Q86VG3 221 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 ARID3BQ8IVW6 561 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-208ENST00000414711 C3orf58Q8NDZ4 430 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 NFKBIZQ9BYH8 718 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 EBF1Q9UH73 591 aa17.4■□□□□ 0.38
CPNE1-208ENST00000414711 EVLQ9UI08 416 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-208ENST00000414711 PRB1P04280 392 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 ZNF423Q2M1K9 1284 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 TRIM61Q5EBN2 209 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 TBCKQ8TEA7 893 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 LXNQ9BS40 222 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 OBP2AQ9NY56 170 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 RAXQ9Y2V3 346 aa17.39■□□□□ 0.37
CPNE1-208ENST00000414711 KIF26AQ9ULI4 1882 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-208ENST00000414711 SLC27A2O14975 620 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
CPNE1-208ENST00000414711 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-208ENST00000414711 SEMA3BQ13214 749 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 PPP2R5CQ13362 524 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 PTPAQ15257 358 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 UPP1Q16831 310 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 GLRA4Q5JXX5 417 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 PIGKQ92643 395 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 UROC1Q96N76 676 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 FBXL5Q9UKA1 691 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 TENM4Q6N022 2769 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 ABCA7Q8IZY2 2146 aa17.38■□□□□ 0.37
CPNE1-208ENST00000414711 CYP3A7-CYP3A51PA0A087WV96 503 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 UPK3BL1B0FP48 263 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 UPK3BL2E5RIL1 263 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 EGFP01133 1207 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 CYP3A7P24462 503 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 DHPSP49366 369 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-208ENST00000414711 DGKEP52429 567 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 TMC8Q8IU68 726 aa17.37■□□□□ 0.37
CPNE1-208ENST00000414711 NUSAP1Q9BXS6 441 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms