RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 NIF3L1Q9GZT8 377 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 NXF3Q9H4D5 531 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ERVK-5Q9HDB9 667 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 PCDHB4Q9Y5E5 795 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 SQORQ9Y6N5 450 aa12.47□□□□□ -0.41
SNRNP35-202ENST00000412157 SCN1AP35498 2009 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 TRIOBPQ9H2D6 2365 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 ZNF263O14978 683 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 CYP26A1O43174 497 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 CST3P01034 146 aaPredicted RBP12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 ITGB3P05106 788 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 P4HA1P13674 534 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 ATICP31939 592 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 ARHGAP25P42331 645 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 RBP5P82980 135 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 MTFR1Q15390 333 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 FAXDC2Q96IV6 333 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 AGPAT1Q99943 283 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 DPP3Q9NY33 737 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 DNAI1Q9UI46 699 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 HES2Q9Y543 173 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 IPPQ9Y573 584 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
SNRNP35-202ENST00000412157 UMODL1Q5DID0 1318 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 A0A0U1RQJ8 604 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 DDX3XO00571 662 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 MEFVO15553 781 aaPredicted RBP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 PJA2O43164 708 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 SGPL1O95470 568 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 CKBP12277 381 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 SKIP12755 728 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ITGA4P13612 1032 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 AKAP5P24588 427 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 CD52P31358 61 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 CASQ1P31415 396 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 RAB27AP51159 221 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 NAB2Q15742 525 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ZNF569Q5MCW4 686 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ZNF618Q5T7W0 954 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ALKBH5Q6P6C2 394 aaKnown RBP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 ARID3AQ99856 593 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 NAGPAQ9UK23 515 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 OGDHLQ9ULD0 1010 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 PADI3Q9ULW8 664 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 PCDHB2Q9Y5E7 798 aa12.45□□□□□ -0.42
SNRNP35-202ENST00000412157 CEP290O15078 2479 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 TACC1O75410 805 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 STAU1O95793 577 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 CD4P01730 458 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 H2AFZP0C0S5 128 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 CYP11B1P15538 503 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 TNNC1P63316 161 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 BFSP2Q13515 415 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 LPIN1Q14693 890 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 TMEM270Q6UE05 265 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 H2AFVQ71UI9 128 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 NOP9Q86U38 636 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 ZNF677Q86XU0 584 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 GLYCTKQ8IVS8 523 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 RBBP8NLQ8NC74 664 aaPredicted RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 SLC20A1Q8WUM9 679 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 SYT11Q9BT88 431 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 HTATIP2Q9BUP3 242 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 AGO3Q9H9G7 860 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms