RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CPB1P15086 417 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 NMT1P30419 496 aaKnown RBP24.29■■□□□ 1.48
MSH6-202ENST00000411819 CEBPZQ03701 1054 aaKnown RBP24.29■■□□□ 1.48
MSH6-202ENST00000411819 RESTQ13127 1097 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 FAM173BQ6P4H8 233 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 NPAS3Q8IXF0 933 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 KRI1Q8N9T8 703 aaKnown RBP24.29■■□□□ 1.48
MSH6-202ENST00000411819 RPP25Q9BUL9 199 aaKnown RBP24.29■■□□□ 1.48
MSH6-202ENST00000411819 TBC1D17Q9HA65 648 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 ARHGEF3Q9NR81 526 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 FOXD4L1Q9NU39 408 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 CCDC39Q9UFE4 941 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 PCDHB8Q9UN66 801 aa24.29■■□□□ 1.48
MSH6-202ENST00000411819 MRPS23Q9Y3D9 190 aaKnown RBP24.29■■□□□ 1.48
MSH6-202ENST00000411819 LACTBL1A8MY62 500 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 XPOTO43592 962 aaKnown RBP24.28■■□□□ 1.48
MSH6-202ENST00000411819 ABLIM3O94929 683 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 RHOP08100 348 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 ATF2P15336 505 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 SYT1P21579 422 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 TXLNAP40222 546 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 GUCY2FP51841 1108 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 MRPL58Q14197 206 aaKnown RBP24.28■■□□□ 1.48
MSH6-202ENST00000411819 PTPAQ15257 358 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 ENOX2Q16206 610 aaKnown RBP24.28■■□□□ 1.48
MSH6-202ENST00000411819 USP49Q70CQ1 688 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 MAP4K3Q8IVH8 894 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 KCNH3Q9ULD8 1083 aa24.28■■□□□ 1.48
MSH6-202ENST00000411819 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.28■■□□□ 1.48
MSH6-202ENST00000411819 ARHGEF37A1IGU5 675 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 TBC1D4O60343 1298 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 LRPAP1P30533 357 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 ABCD1P33897 745 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 DDIT3P35638 169 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 SLC39A4Q6P5W5 647 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 CCDC105Q8IYK2 499 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 FIZ1Q96SL8 496 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 KXD1Q9BQD3 176 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 SLC2A4RGQ9NR83 387 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 FBXO2Q9UK22 296 aaPredicted RBP24.27■■□□□ 1.48
MSH6-202ENST00000411819 INSL5Q9Y5Q6 135 aa24.27■■□□□ 1.48
MSH6-202ENST00000411819 FAM189A1O60320 539 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 GFRA3O60609 400 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 SEC24AO95486 1093 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 PTPN2P17706 415 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 CYP3A5P20815 502 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 YWHAHQ04917 246 aaPredicted RBP24.26■■□□□ 1.47
MSH6-202ENST00000411819 ADCY1Q08828 1119 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 SLC5A9Q2M3M2 681 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 ZC2HC1CQ53FD0 456 aaPredicted RBP24.26■■□□□ 1.47
MSH6-202ENST00000411819 TPGS2Q68CL5 300 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 DSTYKQ6XUX3 929 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 TCEAL8Q8IYN2 117 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 CLIC6Q96NY7 704 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 CORO1BQ9BR76 489 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 STK17AQ9UEE5 414 aa24.26■■□□□ 1.47
MSH6-202ENST00000411819 TIMM13Q9Y5L4 95 aaPredicted RBP24.26■■□□□ 1.47
MSH6-202ENST00000411819 SRPRBQ9Y5M8 271 aaKnown RBP24.26■■□□□ 1.47
MSH6-202ENST00000411819 A0A0B4J269 797 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 GPC5P78333 572 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 GTF2BQ00403 316 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 ZBTB6Q15916 424 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 JADE1Q6IE81 842 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 USP37Q86T82 979 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 SFR1Q86XK3 245 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 ELMOD1Q8N336 334 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 DTWD2Q8NBA8 298 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 BEST2Q8NFU1 509 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 MCRS1Q96EZ8 462 aa24.25■■□□□ 1.47
MSH6-202ENST00000411819 AFF4Q9UHB7 1163 aaKnown RBP24.25■■□□□ 1.47
MSH6-202ENST00000411819 ANK1P16157 1881 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 TISP43B9A030 160 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 M0QZQ0 153 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 CEBPBP17676 345 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 RRAGBQ5VZM2 374 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 ADALQ6DHV7 355 aa24.24■■□□□ 1.47
MSH6-202ENST00000411819 CPSF3Q9UKF6 684 aaKnown RBP24.24■■□□□ 1.47
MSH6-202ENST00000411819 ANKRD63C9JTQ0 380 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 PPEF2O14830 753 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 ACOT2P49753 483 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 ANGPT1Q15389 498 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 RNF19BQ6ZMZ0 732 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 PDZD4Q76G19 769 aaPredicted RBP24.23■■□□□ 1.47
MSH6-202ENST00000411819 CD302Q8IX05 232 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 INTS4Q96HW7 963 aaKnown RBP24.23■■□□□ 1.47
MSH6-202ENST00000411819 TSPAN18Q96SJ8 248 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 BACH2Q9BYV9 841 aa24.23■■□□□ 1.47
MSH6-202ENST00000411819 K7ELQ4 463 aaPredicted RBP24.22■■□□□ 1.47
MSH6-202ENST00000411819 NFICP08651 508 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 AARSP49588 968 aaKnown RBP eCLIP24.22■■□□□ 1.478e-6■■■■■ 52.4
MSH6-202ENST00000411819 TWF1Q12792 350 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 TMEM132DQ14C87 1099 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 SPATA1Q5VX52 437 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 IQCEQ6IPM2 695 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 PHLDB3Q6NSJ2 640 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 SV2BQ7L1I2 683 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 PGLYRP2Q96PD5 576 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 USP28Q96RU2 1077 aa24.22■■□□□ 1.47
MSH6-202ENST00000411819 ST6GALNAC4Q9H4F1 302 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms