RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RABGGTAQ92696 567 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 C17orf80Q9BSJ5 609 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 SPG21Q9NZD8 308 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 SIX4Q9UIU6 781 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 NUB1Q9Y5A7 615 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 ANK1P16157 1881 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 NT5C1B-RDH14C9J2C7 533 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 PIRO00625 290 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 KIF4AO95239 1232 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 PIK3CAP42336 1068 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 FMO5P49326 533 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 ERVK-21P61565 698 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 MYL7Q01449 175 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 CETN1Q12798 172 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 KRT31Q15323 416 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 LRRC52Q8N7C0 313 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 TMEM169Q96HH4 297 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 IGSF21Q96ID5 467 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 MARCH5Q9NX47 278 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 TAB2Q9NYJ8 693 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 LIMA1Q9UHB6 759 aaKnown RBP22.23■■□□□ 1.15
C4orf48-202ENST00000409860 MTUS1Q9ULD2 1270 aa22.23■■□□□ 1.15
C4orf48-202ENST00000409860 TDRD15B5MCY1 1934 aaKnown RBP22.22■■□□□ 1.15
C4orf48-202ENST00000409860 PES1O00541 588 aaKnown RBP22.22■■□□□ 1.15
C4orf48-202ENST00000409860 P4HA2O15460 535 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 TADA2AO75478 443 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 CLSTN1O94985 981 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 RB1P06400 928 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 PAX3P23760 479 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 TAF6P49848 677 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 MYO1EQ12965 1108 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 NCOA4Q13772 614 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 CBWD6Q4V339 395 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 VWA3BQ502W6 1294 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 EPC2Q52LR7 807 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 CBWD3Q5JTY5 395 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 CBWD5Q5RIA9 395 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 CXorf38Q8TB03 319 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 C11orf84Q9BUA3 381 aaPredicted RBP22.22■■□□□ 1.15
C4orf48-202ENST00000409860 ADAM28Q9UKQ2 775 aa22.22■■□□□ 1.15
C4orf48-202ENST00000409860 PDCD11Q14690 1871 aaKnown RBP22.22■■□□□ 1.15
C4orf48-202ENST00000409860 TRIP11Q15643 1979 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 C5orf67F2Z3F1 127 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 PPEF2O14830 753 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 PMM2O15305 246 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 HLA-DRAP01903 254 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 ATP1A3P13637 1013 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 KRT17Q04695 432 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 SV2CQ496J9 727 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 TMEM173Q86WV6 379 aaPredicted RBP22.21■■□□□ 1.15
C4orf48-202ENST00000409860 CCDC150Q8NCX0 1101 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 C3orf58Q8NDZ4 430 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 FBXL13Q8NEE6 735 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 FBXO22Q8NEZ5 403 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 TAS1R2Q8TE23 839 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 HASPINQ8TF76 798 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 IMPG2Q9BZV3 1241 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 NDST4Q9H3R1 872 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 TRIOBPQ9H2D6 2365 aa22.21■■□□□ 1.15
C4orf48-202ENST00000409860 RANBP2P49792 3224 aaKnown RBP22.21■■□□□ 1.15
C4orf48-202ENST00000409860 TMEM265A0A087WTH1 108 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 F8W810 466 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 TRAPPC3O43617 180 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 FGF18O76093 207 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 VNN1O95497 513 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 ATICP31939 592 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 COPB1P53618 953 aaKnown RBP22.2■■□□□ 1.14
C4orf48-202ENST00000409860 ELAVL2Q12926 359 aaKnown RBP22.2■■□□□ 1.14
C4orf48-202ENST00000409860 KLHL23Q8NBE8 558 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 BCL7CQ8WUZ0 217 aaPredicted RBP22.2■■□□□ 1.14
C4orf48-202ENST00000409860 HPDLQ96IR7 371 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 STK39Q9UEW8 545 aa22.2■■□□□ 1.14
C4orf48-202ENST00000409860 SF3B1O75533 1304 aaKnown RBP eCLIP22.2■■□□□ 1.14
C4orf48-202ENST00000409860 CST3P01034 146 aaPredicted RBP22.19■■□□□ 1.14
C4orf48-202ENST00000409860 ITGB1P05556 798 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 LILRA4P59901 499 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 MYL6P60660 151 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 PLCB3Q01970 1234 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 SGSM1Q2NKQ1 1148 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 ZNF699Q32M78 642 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 MIIPQ5JXC2 388 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 FUT10Q6P4F1 479 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 SPRED2Q7Z698 418 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 ARNTL2Q8WYA1 636 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 TAF4BQ92750 862 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 VPS16Q9H269 839 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 CERS4Q9HA82 394 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 RAB20Q9NX57 234 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 COQ4Q9Y3A0 265 aa22.19■■□□□ 1.14
C4orf48-202ENST00000409860 ARHGEF37A1IGU5 675 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 LRRC10BA6NIK2 292 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 STAU1O95793 577 aaKnown RBP22.18■■□□□ 1.14
C4orf48-202ENST00000409860 SERPINC1P01008 464 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 AARSP49588 968 aaKnown RBP eCLIP22.18■■□□□ 1.14
C4orf48-202ENST00000409860 FILIP1LQ4L180 1135 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 WDR44Q5JSH3 913 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 FKBP15Q5T1M5 1219 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 CD300LGQ6UXG3 332 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 DSTYKQ6XUX3 929 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 DDX53Q86TM3 631 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms