RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 BIRC3Q13489 604 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 DCLRE1AQ6PJP8 1040 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM130Q8N3G9 435 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 C17orf80Q9BSJ5 609 aa17.93■□□□□ 0.46
SUMO1-208ENST00000409627 LIMA1Q9UHB6 759 aaKnown RBP17.93■□□□□ 0.46
SUMO1-208ENST00000409627 RANBP2P49792 3224 aaKnown RBP17.92■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM265A0A087WTH1 108 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 NT5C1B-RDH14C9J2C7 533 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 PPEF2O14830 753 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 P4HA2O15460 535 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 PHACTR2O75167 634 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 B3GAT3O94766 335 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 RB1P06400 928 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 PAX3P23760 479 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 PNPLA4P41247 253 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 FMO5P49326 533 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 KRT31Q15323 416 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 CBWD6Q4V339 395 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 EPC2Q52LR7 807 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 CBWD3Q5JTY5 395 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 CBWD5Q5RIA9 395 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 C3orf58Q8NDZ4 430 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 RABGGTAQ92696 567 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 IGSF21Q96ID5 467 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 ZNF560Q96MR9 790 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 MMRN2Q9H8L6 949 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 SPG21Q9NZD8 308 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 ADAM28Q9UKQ2 775 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 AGAP1Q9UPQ3 857 aa17.92■□□□□ 0.46
SUMO1-208ENST00000409627 COL4A4P53420 1690 aaPredicted RBP17.92■□□□□ 0.46
SUMO1-208ENST00000409627 VNN1O95497 513 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 KRT19P08727 400 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 TAF6P49848 677 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 MYL7Q01449 175 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 PLCB3Q01970 1234 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 TRPC3Q13507 836 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 NCOA4Q13772 614 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 MIIPQ5JXC2 388 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 CD300LGQ6UXG3 332 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM173Q86WV6 379 aaPredicted RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 BCL7CQ8WUZ0 217 aaPredicted RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 TMEM169Q96HH4 297 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 COQ4Q9Y3A0 265 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
SUMO1-208ENST00000409627 TSC2P49815 1807 aa17.91■□□□□ 0.46
SUMO1-208ENST00000409627 LRRC10BA6NIK2 292 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 F8W810 466 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 TADA2AO75478 443 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 EFEMP2O95967 443 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 CST3P01034 146 aaPredicted RBP17.9■□□□□ 0.46
SUMO1-208ENST00000409627 ITGB1P05556 798 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 TPM2P07951 284 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 ATICP31939 592 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 PIK3CAP42336 1068 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 AARSP49588 968 aaKnown RBP eCLIP17.9■□□□□ 0.46
SUMO1-208ENST00000409627 SV2CQ496J9 727 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 SCARA3Q6AZY7 606 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 KLHL23Q8NBE8 558 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 FBXL13Q8NEE6 735 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 C11orf84Q9BUA3 381 aaPredicted RBP17.9■□□□□ 0.46
SUMO1-208ENST00000409627 NDST4Q9H3R1 872 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 TAB2Q9NYJ8 693 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 STK39Q9UEW8 545 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 NUB1Q9Y5A7 615 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 SF3B1O75533 1304 aaKnown RBP eCLIP17.9■□□□□ 0.46
SUMO1-208ENST00000409627 VWA8A3KMH1 1905 aa17.9■□□□□ 0.46
SUMO1-208ENST00000409627 TRIOBPQ9H2D6 2365 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 GTPBP10A4D1E9 387 aaKnown RBP17.89■□□□□ 0.45
SUMO1-208ENST00000409627 FGF18O76093 207 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 COPB1P53618 953 aaKnown RBP17.89■□□□□ 0.45
SUMO1-208ENST00000409627 LILRA4P59901 499 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 CETN1Q12798 172 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 ELAVL2Q12926 359 aaKnown RBP17.89■□□□□ 0.45
SUMO1-208ENST00000409627 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 FUT10Q6P4F1 479 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
SUMO1-208ENST00000409627 GAS2L3Q86XJ1 694 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 RNF168Q8IYW5 571 aaPredicted RBP17.89■□□□□ 0.45
SUMO1-208ENST00000409627 RNF214Q8ND24 703 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 FBXO22Q8NEZ5 403 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 HASPINQ8TF76 798 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 TAF4BQ92750 862 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 HPDLQ96IR7 371 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 VRTNQ9H8Y1 702 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 MTUS1Q9ULD2 1270 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 LZTS1Q9Y250 596 aa17.89■□□□□ 0.45
SUMO1-208ENST00000409627 SOX1O00570 391 aaPredicted RBP17.88■□□□□ 0.45
SUMO1-208ENST00000409627 TRAPPC3O43617 180 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 IGFBP6P24592 240 aaPredicted RBP17.88■□□□□ 0.45
SUMO1-208ENST00000409627 MYL6P60660 151 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms