RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ASPAP45381 313 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 PDE6CP51160 858 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 YARSP54577 528 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 SMG8Q8ND04 991 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 ZMAT2Q96NC0 199 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 PLEKHA5Q9HAU0 1116 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 STARD7Q9NQZ5 370 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 TAS2R14Q9NYV8 317 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 POLIQ9UNA4 740 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 ST3GAL5Q9UNP4 418 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 NOD1Q9Y239 953 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 IPPQ9Y573 584 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 CAPN6Q9Y6Q1 641 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 FAM170AA1A519 330 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 MOCS3O95396 460 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 MYCP01106 439 aaPredicted RBP15.08■□□□□ 0
GPNMB-203ENST00000409458 MMEP08473 750 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 HSPA6P17066 643 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 POLR2BP30876 1174 aaKnown RBP15.08■□□□□ 0
GPNMB-203ENST00000409458 FMO1Q01740 532 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 TWF2Q6IBS0 349 aaKnown RBP15.08■□□□□ 0
GPNMB-203ENST00000409458 TMEM270Q6UE05 265 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 ALKAL1Q6UXT8 129 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 SCARA5Q6ZMJ2 495 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 NT5DC4Q86YG4 428 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 SLC43A3Q8NBI5 491 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 DDX1Q92499 740 aaKnown RBP15.08■□□□□ 0
GPNMB-203ENST00000409458 PCDHB18PQ96TA0 734 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 WBP1LQ9NX94 342 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 DPP3Q9NY33 737 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 CNTN3Q9P232 1028 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 ITGA11Q9UKX5 1188 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 PHF24Q9UPV7 400 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 DERAQ9Y315 318 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 PCDHB4Q9Y5E5 795 aa15.08■□□□□ 0
GPNMB-203ENST00000409458 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
GPNMB-203ENST00000409458 GHRP10912 638 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 CDR2Q01850 454 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 NFX1Q12986 1120 aaKnown RBP15.07■□□□□ 0
GPNMB-203ENST00000409458 MTFR1Q15390 333 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 GLRA4Q5JXX5 417 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 FBXO47Q5MNV8 452 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
GPNMB-203ENST00000409458 ARRDC4Q8NCT1 418 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 TAF4BQ92750 862 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 TRPV6Q9H1D0 765 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 RNF39Q9H2S5 420 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 AGO3Q9H9G7 860 aaKnown RBP15.07■□□□□ 0
GPNMB-203ENST00000409458 ERVK-5Q9HDB9 667 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 PAK6Q9NQU5 681 aaPredicted RBP15.07■□□□□ 0
GPNMB-203ENST00000409458 RNF19AQ9NV58 838 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 TUBGCP4Q9UGJ1 667 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 CNTN6Q9UQ52 1028 aa15.07■□□□□ 0
GPNMB-203ENST00000409458 KBTBD13C9JR72 458 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 BUB1O43683 1085 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 CD58P19256 250 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 ZNF132P52740 706 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 NAPGQ99747 312 aaPredicted RBP15.06■□□□□ 0
GPNMB-203ENST00000409458 KLK14Q9P0G3 267 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 NXF1Q9UBU9 619 aaKnown RBP15.06■□□□□ 0
GPNMB-203ENST00000409458 PARP2Q9UGN5 583 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 AGAP1Q9UPQ3 857 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 CTAGE9A4FU28 777 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 BTNL10A8MVZ5 291 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 URI1O94763 535 aaPredicted RBP15.06■□□□□ 0
GPNMB-203ENST00000409458 H2AFZP0C0S5 128 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 CD52P31358 61 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 RAP1GAPP47736 663 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 GALCP54803 685 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 LPIN1Q14693 890 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 ZBTB6Q15916 424 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 ZNF667Q5HYK9 610 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 FAM26DQ5JW98 314 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 H2AFVQ71UI9 128 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 C18orf25Q96B23 403 aaPredicted RBP15.06■□□□□ 0
GPNMB-203ENST00000409458 BCO2Q9BYV7 579 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 VRTNQ9H8Y1 702 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 L2HGDHQ9H9P8 463 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 CISHQ9NSE2 258 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 INTUQ9ULD6 942 aa15.06■□□□□ 0
GPNMB-203ENST00000409458 ARVCFO00192 962 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 DNM1LO00429 736 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 GPR182O15218 404 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 TACC1O75410 805 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 WEE2P0C1S8 567 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 ATICP31939 592 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 RBP5P82980 135 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 PAK2Q13177 524 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 WDR72Q3MJ13 1102 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 XKR4Q5GH76 650 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 RNF10Q8N5U6 811 aaKnown RBP15.05■□□□□ -0
GPNMB-203ENST00000409458 HPDLQ96IR7 371 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 SDCBP2Q9H190 292 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 SMYD3Q9H7B4 428 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 CHST12Q9NRB3 414 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 FAM105AQ9NUU6 356 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 PADI3Q9ULW8 664 aa15.05■□□□□ -0
GPNMB-203ENST00000409458 PCDHB2Q9Y5E7 798 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms