RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CPB2Q96IY4 423 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 GLT1D1Q96MS3 346 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.73
POLR1A-202ENST00000409024 OSMRQ99650 979 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 AGPAT1Q99943 283 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 RAPGEFL1Q9UHV5 662 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 DNAI1Q9UI46 699 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.73
POLR1A-202ENST00000409024 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
POLR1A-202ENST00000409024 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
POLR1A-202ENST00000409024 ALPK3Q96L96 1907 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CTAGE9A4FU28 777 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 DDX3XO00571 662 aaKnown RBP eCLIP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CXCL8P10145 99 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 PDE6CP51160 858 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 WNT7BP56706 349 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TUBB4BP68371 445 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF200P98182 395 aaPredicted RBP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TFAMQ00059 246 aaKnown RBP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CYP27A1Q02318 531 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 MGAT3Q09327 533 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ITGA7Q13683 1181 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TMEM132DQ14C87 1099 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 XKR4Q5GH76 650 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF569Q5MCW4 686 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 LHX8Q68G74 356 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ALKAL1Q6UXT8 129 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TRIM72Q6ZMU5 477 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TATDN2Q93075 761 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF668Q96K58 619 aaPredicted RBP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 NOX5Q96PH1 765 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ALS2CR12Q96Q35 445 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 TRIM6Q9C030 488 aaPredicted RBP10.51□□□□□ -0.73
POLR1A-202ENST00000409024 MTMR12Q9C0I1 747 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 NIF3L1Q9GZT8 377 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 ISCUQ9H1K1 167 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 C11orf49Q9H6J7 331 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 L2HGDHQ9H9P8 463 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CYP3A43Q9HB55 503 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 GUCA1BQ9UMX6 200 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 PTPRJQ12913 1337 aa10.51□□□□□ -0.73
POLR1A-202ENST00000409024 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 ANKRD62A6NC57 917 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 NPTXRO95502 500 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CST3P01034 146 aaPredicted RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CD4P01730 458 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 FAM163BP0C2L3 166 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 TMEM253P0C7T8 217 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 SKIP12755 728 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 KCNE1P15382 129 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CYP11B1P15538 503 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 PRLRP16471 622 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CYP3A5P20815 502 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 HOXD11P31277 338 aaPredicted RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 RBP5P82980 135 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CDR2Q01850 454 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 ZBTB6Q15916 424 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 PTGISQ16647 500 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 SEZ6Q53EL9 994 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CEP120Q8N960 986 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 BEST2Q8NFU1 509 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 SNX27Q96L92 541 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 NAPGQ99747 312 aaPredicted RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 SENP6Q9GZR1 1112 aaPredicted RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 LACRTQ9GZZ8 138 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 CNTN3Q9P232 1028 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 PHF24Q9UPV7 400 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 PIN4Q9Y237 131 aaKnown RBP10.5□□□□□ -0.73
POLR1A-202ENST00000409024 GINS2Q9Y248 185 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 JRKLQ9Y4A0 524 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 GRIN2DO15399 1336 aa10.5□□□□□ -0.73
POLR1A-202ENST00000409024 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 KBTBD13C9JR72 458 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 CYP26A1O43174 497 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 RTN2O75298 545 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 LRRN2O75325 713 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 CSDE1O75534 798 aaKnown RBP10.49□□□□□ -0.73
POLR1A-202ENST00000409024 RPS6KA5O75582 802 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 ACO1P21399 889 aaKnown RBP10.49□□□□□ -0.73
POLR1A-202ENST00000409024 PAX3P23760 479 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
POLR1A-202ENST00000409024 USP8P40818 1118 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 RAB27AP51159 221 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 HADHBP55084 474 aaKnown RBP10.49□□□□□ -0.73
POLR1A-202ENST00000409024 MYL6P60660 151 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 OSTNP61366 133 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 TMEM62Q0P6H9 643 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 MYO1EQ12965 1108 aa10.49□□□□□ -0.73
POLR1A-202ENST00000409024 ZNF699Q32M78 642 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms