RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AVENQ9NQS1 362 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-202ENST00000403162 KCNH7Q9NS40 1196 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 CTNNAL1Q9UBT7 734 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 ANAPC7Q9UJX3 599 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 GOLGA8IPA6NC78 632 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 GOLGA8JA6NMD2 632 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 THAP12O43422 761 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 BRAFP15056 766 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 ATF2P15336 505 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 IBSPP21815 317 aaPredicted RBP21.09■□□□□ 0.97
CCDC47-202ENST00000403162 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
CCDC47-202ENST00000403162 HSD17B4P51659 736 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 KYNUQ16719 465 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 TREML2Q5T2D2 321 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 ANKRD42Q8N9B4 389 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 FAM81BQ96LP2 452 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 NINJ2Q9NZG7 142 aa21.09■□□□□ 0.97
CCDC47-202ENST00000403162 SLC16A4O15374 487 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 SLC1A1P43005 524 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 ALDH5A1P51649 535 aaPredicted RBP21.08■□□□□ 0.97
CCDC47-202ENST00000403162 CENPCQ03188 943 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 MPP2Q14168 576 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 CATSPERGQ6ZRH7 1159 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 FBXL13Q8NEE6 735 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 ATL2Q8NHH9 583 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 ATG4AQ8WYN0 398 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 STAMBPL1Q96FJ0 436 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 IFT74Q96LB3 600 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 ANAPC5Q9UJX4 755 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 EXOC7Q9UPT5 735 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 ACTL7BQ9Y614 415 aa21.08■□□□□ 0.97
CCDC47-202ENST00000403162 PTPRFP10586 1907 aa21.08■□□□□ 0.96
CCDC47-202ENST00000403162 IGF2BP3O00425 579 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 ADSSP30520 456 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 ACCSLQ4AC99 568 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 ARHGEF18Q6ZSZ5 1173 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 RELL1Q8IUW5 271 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 SMC1BQ8NDV3 1235 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 TMC2Q8TDI7 906 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 WNK4Q96J92 1243 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 MAGEB18Q96M61 343 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 ARHGEF3Q9NR81 526 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 GGT7Q9UJ14 662 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 NEU2Q9Y3R4 380 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 CTDP1Q9Y5B0 961 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 GTF2H1P32780 548 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 PEX3P56589 373 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 HUNKP57058 714 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 PTP4A2Q12974 167 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 MKRN4PQ13434 485 aaPredicted RBP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 SNAPC2Q13487 334 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 CRYMQ14894 314 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 LLGL1Q15334 1064 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 AGAP11Q8TF27 550 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 MIEF2Q96C03 454 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 KLHL29Q96CT2 875 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 ATG4CQ96DT6 458 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 TGS1Q96RS0 853 aaKnown RBP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 HERPUD2Q9BSE4 406 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 RAB20Q9NX57 234 aa21.07■□□□□ 0.96
CCDC47-202ENST00000403162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC47-202ENST00000403162 MROH7Q68CQ1 1323 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 CDH16O75309 829 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 GH1P01241 217 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 YWHABP31946 246 aaKnown RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 RNF43Q68DV7 783 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 ASRGL1Q7L266 308 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 GDAP1Q8TB36 358 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 TAS1R2Q8TE23 839 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 DDX27Q96GQ7 796 aaKnown RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 PKD2L1Q9P0L9 805 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 C15orf41Q9Y2V0 281 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 ZBED4O75132 1171 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 MYBL1P10243 752 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 UNGP13051 313 aaPredicted RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 STX2P32856 288 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 SKIV2L2P42285 1042 aaKnown RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 SLC8A3P57103 927 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 ACVR2BQ13705 512 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 PPP1R21Q6ZMI0 780 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 ENOSF1Q7L5Y1 443 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 MAP4K3Q8IVH8 894 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 MCOLN2Q8IZK6 566 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 CPXCR1Q8N123 301 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 FITM2Q8N6M3 262 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 BBOF1Q8ND07 529 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 CCDC127Q96BQ5 260 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 GRAMD1AQ96CP6 724 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 RSRC1Q96IZ7 334 aaKnown RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 SLC38A10Q9HBR0 1119 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 AGO4Q9HCK5 861 aaKnown RBP21.06■□□□□ 0.96
CCDC47-202ENST00000403162 SUFUQ9UMX1 484 aa21.06■□□□□ 0.96
CCDC47-202ENST00000403162 VWA5AO00534 786 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 SCP2P22307 547 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 DSG3P32926 999 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 ADCY8P40145 1251 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 CCDC15Q0P6D6 951 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms