RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ARHGAP20Q9P2F6 1191 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ABHD2P08910 425 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 ATF7P17544 494 aaPredicted RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 RTP1P59025 263 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 STK4Q13043 487 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 PRR23CQ6ZRP0 262 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 MYCT1Q8N699 235 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 OMA1Q96E52 524 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 OXNAD1Q96HP4 312 aaPredicted RBP10.49□□□□□ -0.73
PTPRM-203ENST00000400060 VPS45Q9NRW7 570 aa10.49□□□□□ -0.73
PTPRM-203ENST00000400060 M0R3G1 203 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 RGL2O15211 777 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 CFLARO15519 480 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SERPINB2P05120 415 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 CASP1P29466 404 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PTPN12Q05209 780 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 LSAMPQ13449 338 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 FLOT2Q14254 428 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF564Q8TBZ8 553 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 BRD8Q9H0E9 1235 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 COQ6Q9Y2Z9 468 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 DUSP10Q9Y6W6 482 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 NPHP4O75161 1426 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 KRT36O76013 467 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 AUHQ13825 339 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PFKFB3Q16875 520 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 EDRF1Q3B7T1 1238 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 CSRNP1Q96S65 589 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 CNPY3Q9BT09 278 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 FRMD8Q9BZ67 464 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 GRIP2Q9C0E4 1043 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 VWDEQ8N2E2 1590 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 DLC1Q96QB1 1528 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 GPR75-ASB3A0A0A6YYF3 556 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 KRT1P04264 644 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PCCAP05165 728 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 LDHBP07195 334 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 KRT7P08729 469 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 MXI1P50539 228 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TTI2Q6NXR4 508 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TBC1D16Q8TBP0 767 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ASB3Q9Y575 518 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SESN1Q9Y6P5 492 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TMEM247A6NEH6 219 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SORBS3O60504 671 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ACAT1P24752 427 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 PDIA2Q13087 525 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 C11orf63Q6NUN7 778 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ERI1Q8IV48 349 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SMYD1Q8NB12 490 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 GIPC2Q8TF65 315 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 TRIM9Q9C026 710 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 STN1Q9H668 368 aaKnown RBP10.48□□□□□ -0.73
PTPRM-203ENST00000400060 GNPTGQ9UJJ9 305 aa10.48□□□□□ -0.73
PTPRM-203ENST00000400060 ENTPD5O75356 428 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 H2AFYO75367 372 aaKnown RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CRCPO75575 148 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 GALCP54803 685 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PTK2Q05397 1052 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 NR1D2Q14995 579 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PDK4Q16654 411 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PROSER3Q2NL68 480 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 RTKN2Q8IZC4 609 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 TSPAN14Q8NG11 270 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF507Q8TCN5 953 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 E2F7Q96AV8 911 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CCDC127Q96BQ5 260 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 STK33Q9BYT3 514 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 GJB4Q9NTQ9 266 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 DDX56Q9NY93 547 aaKnown RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZSWIM5Q9P217 1185 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 NBPF26B4DH59 902 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PEX11AO75192 247 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ITGA8P53708 1063 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZNF211Q13398 564 aaPredicted RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 RPS6KA2Q15349 733 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 NIPAL1Q6NVV3 410 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZBED8Q8IZ13 594 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ACAP3Q96P50 834 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms