RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 ITIH2P19823 946 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 EFL1Q7Z2Z2 1120 aaKnown RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ATPAF2Q8N5M1 289 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SKA1Q96BD8 255 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 A8MXQ7 604 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ATP9BO43861 1147 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 PRMT3O60678 531 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 NCALDP61601 193 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SH3RF3Q8TEJ3 882 aaPredicted RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 MED15Q96RN5 788 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 AGPAT1Q99943 283 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 HDDC2Q7Z4H3 204 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 IL17RAQ96F46 866 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 THTPAQ9BU02 230 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 APPL1Q9UKG1 709 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SMAPO00193 183 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SCP2P22307 547 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ADORA2BP29275 332 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 RGS4P49798 205 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 MRPS35P82673 323 aaKnown RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 AGBL2Q5U5Z8 902 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 KIF12Q96FN5 646 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ATP1A1P05023 1023 aaKnown RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 SOX6P35712 828 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 WLSQ5T9L3 541 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 LY9Q9HBG7 655 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ZBTB1Q9Y2K1 713 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 TRAPPC3O43617 180 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 CHN1P15882 459 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 PTPN12Q05209 780 aaKnown RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 C17orf80Q9BSJ5 609 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 C20orf96Q9NUD7 363 aaPredicted RBP14.06□□□□□ -0.16
LDLRAD4-203ENST00000399848 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 RSPH10B2B2RC85 870 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 H0YC42 278 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 NFIBO00712 420 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 SLC26A4O43511 780 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 RSPH10BP0C881 870 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 CDC42EP1Q00587 391 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 STILQ15468 1287 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TRIP4Q15650 581 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 GJC2Q5T442 439 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 EIF2AK1Q9BQI3 630 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 LARGE1O95461 756 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 COBLL1Q53SF7 1204 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TERB1Q8NA31 727 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 ZNF473Q8WTR7 871 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 GABBR1Q9UBS5 961 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 PRG3Q9Y2Y8 225 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 LCP1P13796 627 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 SLC18A3Q16572 532 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TRMT2AQ8IZ69 625 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 FKBP9O95302 570 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 FDX1P10109 184 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TOB2Q14106 344 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 KPNB1Q14974 876 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 FKBP9P1Q75LS8 142 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 CCT7Q99832 543 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 CYBBP04839 570 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 GRM4Q14833 912 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 LRRC36Q1X8D7 754 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 INPP5DQ92835 1189 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 MASTLQ96GX5 879 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 CLMNQ96JQ2 1002 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 KRCC1Q9NPI7 259 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 AKAP7Q9P0M2 348 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 DCDC2CA8MYV0 355 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 MAP3K13O43283 966 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 SRP72O76094 671 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 CLEC4GQ6UXB4 293 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 TMEM47Q9BQJ4 181 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 AP4S1Q9Y587 144 aa14.05□□□□□ -0.16
LDLRAD4-203ENST00000399848 EVPLLA8MZ36 301 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 NBNO60934 754 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 CAPZA2P47755 286 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 MTFR1Q15390 333 aa14.04□□□□□ -0.16
LDLRAD4-203ENST00000399848 IYDQ6PHW0 289 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms