RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 MCM6Q14566 821 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 HSP90AA2PQ14568 343 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 USP41Q3LFD5 358 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 ZNF568Q3ZCX4 644 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 KIAA0319Q5VV43 1072 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 MYCT1Q8N699 235 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 PHF7Q9BWX1 381 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 CDT1Q9H211 546 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 CHST7Q9NS84 486 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-201ENST00000399292 CASTOR2A6NHX0 329 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 TOM1L1O75674 476 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 FAM13AO94988 1023 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 MCF2P10911 925 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 EPCAMP16422 314 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 SCP2P22307 547 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 TXLNAP40222 546 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 PTGIRP43119 386 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 CLCN4P51793 760 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 OSTNP61366 133 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 DSG1Q02413 1049 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 CBX2Q14781 532 aaPredicted RBP12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 RRAGBQ5VZM2 374 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 GPR65Q8IYL9 337 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 ZBTB45Q96K62 511 aaPredicted RBP12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 REEP2Q9BRK0 252 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 PARVGQ9HBI0 331 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 RXFP1Q9HBX9 757 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
SMIM11A-201ENST00000399292 SMIM28A0A1B0GU29 152 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 TEX28O15482 410 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 CLDN3O15551 220 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 DCXO43602 365 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 TRAK2O60296 914 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 BRD1O95696 1058 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 PROZP22891 400 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 NAB2Q15742 525 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 ATAT1Q5SQI0 421 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 RNF135Q8IUD6 432 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 CEP120Q8N960 986 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 FBXL18Q96ME1 805 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 CACNG4Q9UBN1 327 aa12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 MORC2Q9Y6X9 1032 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 SF3B1O75533 1304 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMIM11A-201ENST00000399292 TBCAO75347 108 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 ABCD1P33897 745 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 MTHFRP42898 656 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 ZNF131P52739 623 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 STK38Q15208 465 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 GLRA4Q5JXX5 417 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 HASPINQ8TF76 798 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 KCNN1Q92952 543 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 BICD1Q96G01 975 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 B3GALT6Q96L58 329 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 UROC1Q96N76 676 aa12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 PPP1R10Q96QC0 940 aaKnown RBP12.86□□□□□ -0.35
SMIM11A-201ENST00000399292 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms