RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 PDZD4Q76G19 769 aaPredicted RBP17.67■□□□□ 0.42
CUX2-202ENST00000397643 NECAB1Q8N987 351 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 NSUN7Q8NE18 718 aaKnown RBP17.67■□□□□ 0.42
CUX2-202ENST00000397643 NETO1Q8TDF5 533 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 FAM3CQ92520 227 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 CDT1Q9H211 546 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 TRPV4Q9HBA0 871 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 CEP72Q9P209 647 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
CUX2-202ENST00000397643 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 MCM7P33993 719 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 VIPR2P41587 438 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 ARPP19P56211 112 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 ECM1Q16610 540 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 DEPDC1BQ8WUY9 529 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 RAB23Q9ULC3 237 aa17.66■□□□□ 0.42
CUX2-202ENST00000397643 ABLIM1O14639 778 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 HRO43593 1189 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 GJA1P17302 382 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 MCM2P49736 904 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 PPP2R5DQ14738 602 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 ME3Q16798 604 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 ST3GAL2Q16842 350 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 PPM1JQ5JR12 505 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 TPGS2Q68CL5 300 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 PRR23BQ6ZRT6 265 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 ZSCAN18Q8TBC5 510 aaPredicted RBP17.65■□□□□ 0.42
CUX2-202ENST00000397643 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 RSPRY1Q96DX4 576 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 ACO2Q99798 780 aaKnown RBP17.65■□□□□ 0.42
CUX2-202ENST00000397643 SEMA4GQ9NTN9 838 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 SLC38A7Q9NVC3 462 aa17.65■□□□□ 0.42
CUX2-202ENST00000397643 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 K7ESF4 209 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 JAK2O60674 1132 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 KCNE1P15382 129 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 CCNE1P24864 410 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 CXCL12P48061 93 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 FOSBP53539 338 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 OSTNP61366 133 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 TWF1Q12792 350 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 SRSF5Q13243 272 aaKnown RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 PTGDRQ13258 359 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 CYP4A22Q5TCH4 519 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 PRR23CQ6ZRP0 262 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 TAS1R3Q7RTX0 852 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 MFSD6LQ8IWD5 586 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 SHKBP1Q8TBC3 707 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 C18orf25Q96B23 403 aaPredicted RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 SUSD3Q96L08 255 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 IFT74Q96LB3 600 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 CCDC94Q9BW85 323 aaPredicted RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 TOPORSQ9NS56 1045 aaPredicted RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 CNTN3Q9P232 1028 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 AFF4Q9UHB7 1163 aaKnown RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 PDCD11Q14690 1871 aaKnown RBP17.64■□□□□ 0.41
CUX2-202ENST00000397643 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 CITO14578 2027 aa17.64■□□□□ 0.41
CUX2-202ENST00000397643 HEPACAM2A8MVW5 462 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 CHURC1-FNTBB4DL54 471 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 H7C4K7 107 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 ZNF263O14978 683 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 GDF9O60383 454 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 VNN2O95498 520 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 PROZP22891 400 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 FNTBP49356 437 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 MLLT6P55198 1093 aaPredicted RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 SIM2Q14190 667 aaPredicted RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 TEAD2Q15562 447 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 CSRP2Q16527 193 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 ZNF568Q3ZCX4 644 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 CTXN3Q4LDR2 81 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 SPEM1Q8N4L4 309 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 ERMNQ8TAM6 284 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 ZSCAN31Q96LW9 406 aaPredicted RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 LRRC3Q9BY71 257 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 RBM12Q9NTZ6 932 aaKnown RBP17.63■□□□□ 0.41
CUX2-202ENST00000397643 C2orf42Q9NWW7 574 aa17.63■□□□□ 0.41
CUX2-202ENST00000397643 K7ERI5 159 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 OR52Z1P0C646 297 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 MYL4P12829 197 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 MUTP22033 750 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 HOXC13P31276 330 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 RPL9P32969 192 aaKnown RBP17.62■□□□□ 0.41
CUX2-202ENST00000397643 NPTX2P47972 431 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 SOX9P48436 509 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 FCHO2Q0JRZ9 810 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 ST3GAL1Q11201 340 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 IQCEQ6IPM2 695 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 ZNF280DQ6N043 979 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 Q6ZS52 159 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms