RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 PDE12Q6L8Q7 609 aaKnown RBP14.34□□□□□ -0.11
SEC13-209ENST00000397117 SLC24A5Q71RS6 500 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 BORCS6Q96GS4 357 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 ADAM2Q99965 735 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 AAASQ9NRG9 546 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 C1orf112Q9NSG2 853 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 TBKBP1A7MCY6 615 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 TSPAN1O60635 241 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 RPS6KA5O75582 802 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 AFPP02771 609 aaKnown RBP14.33□□□□□ -0.11
SEC13-209ENST00000397117 MCL1Q07820 350 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 KCNH2Q12809 1159 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 PTPN21Q16825 1174 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 APBB1IPQ7Z5R6 666 aaPredicted RBP14.33□□□□□ -0.11
SEC13-209ENST00000397117 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 COLGALT1Q8NBJ5 622 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 TMEM40Q8WWA1 233 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 CPB2Q96IY4 423 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.11
SEC13-209ENST00000397117 ADPGKQ9BRR6 497 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 CWH43Q9H720 699 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.11
SEC13-209ENST00000397117 HCSTQ9UBK5 93 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 ST3GAL5Q9UNP4 418 aa14.33□□□□□ -0.11
SEC13-209ENST00000397117 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
SEC13-209ENST00000397117 FGFR4P22455 802 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 PROZP22891 400 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 AVPR2P30518 371 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 ACOT2P49753 483 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 VAMP7P51809 220 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 VCPP55072 806 aaKnown RBP14.33□□□□□ -0.12
SEC13-209ENST00000397117 SPOUT1Q5T280 376 aaKnown RBP14.33□□□□□ -0.12
SEC13-209ENST00000397117 SLC35C1Q96A29 364 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 SNX27Q96L92 541 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 HAPLN2Q9GZV7 340 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 PTPRHQ9HD43 1115 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 IMPACTQ9P2X3 320 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 LZTS1Q9Y250 596 aa14.33□□□□□ -0.12
SEC13-209ENST00000397117 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
SEC13-209ENST00000397117 OGTO15294 1046 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 STX10O60499 249 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 ADRB2P07550 413 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 MCF2P10911 925 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 IBSPP21815 317 aaPredicted RBP14.32□□□□□ -0.12
SEC13-209ENST00000397117 PLCB3Q01970 1234 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 CYP24A1Q07973 514 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 DSC3Q14574 896 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 ANKRD54Q6NXT1 300 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 NOTUMQ6P988 496 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 SYCE2Q6PIF2 218 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 CDR2LQ86X02 465 aaPredicted RBP14.32□□□□□ -0.12
SEC13-209ENST00000397117 CCDC127Q96BQ5 260 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 PDZD7Q9H5P4 517 aa14.32□□□□□ -0.12
SEC13-209ENST00000397117 RBAKQ9NYW8 714 aaPredicted RBP14.32□□□□□ -0.12
SEC13-209ENST00000397117 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.32□□□□□ -0.121e-7■□□□□ 8.8
SEC13-209ENST00000397117 PLXNA3P51805 1871 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 USP34Q70CQ2 3546 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 A0A1B0GUA9 196 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 GPR182O15218 404 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TPM1P09493 284 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TRIM49P0CI25 452 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TRIM49CP0CI26 452 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 AXLP30530 894 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 PBX1P40424 430 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 SYCP1Q15431 976 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 KYAT1Q16773 422 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 THNSL1Q8IYQ7 743 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TMC2Q8TDI7 906 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TRIM44Q96DX7 344 aaPredicted RBP14.31□□□□□ -0.12
SEC13-209ENST00000397117 ERGIC2Q96RQ1 377 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 CDT1Q9H211 546 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 ELAC1Q9H777 363 aaKnown RBP14.31□□□□□ -0.12
SEC13-209ENST00000397117 MMRN2Q9H8L6 949 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 TMEM161AQ9NX61 479 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 SPTBN4Q9H254 2564 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 ITIH6Q6UXX5 1313 aa14.31□□□□□ -0.12
SEC13-209ENST00000397117 ABLIM1O14639 778 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 N4BP1O75113 896 aaKnown RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 FGFR1P11362 822 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 GSDMDP57764 484 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 ENPEPQ07075 957 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 CETN1Q12798 172 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 DCAF4L1Q3SXM0 396 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 FAM228AQ86W67 206 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 RNF19AQ9NV58 838 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 RIF1Q5UIP0 2472 aaKnown RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 LAG3P18627 525 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
SEC13-209ENST00000397117 FMO5P49326 533 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 OSTNP61366 133 aa14.3□□□□□ -0.12
SEC13-209ENST00000397117 DLG4P78352 724 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms