RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 KRT5P13647 590 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 IVDP26440 423 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 GRIPAP1Q4V328 841 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 OR52E8Q6IFG1 317 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 IRGCQ6NXR0 463 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 ACTL7BQ9Y614 415 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 ASMTLO95671 621 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 PDCD2Q16342 344 aaPredicted RBP25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 CEP55Q53EZ4 464 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 LRRC8CQ8TDW0 803 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 MORC4Q8TE76 937 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 SLCO2A1Q92959 643 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 KLHL11Q9NVR0 708 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 IPO5O00410 1097 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 ADCY8P40145 1251 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 STAT2P52630 851 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 POLE2P56282 527 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 LMNB2Q03252 620 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 PPP2R5CQ13362 524 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 TMED2Q15363 201 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 KHDC1Q4VXA5 237 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 SH3TC2Q8TF17 1288 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 ANAPC5Q9UJX4 755 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 HHIPL2Q6UWX4 724 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 TRIM4Q9C037 500 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 STOML1Q9UBI4 398 aa25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 ZNFX1Q9P2E3 1918 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-203ENST00000396832 LMNAP02545 664 aaKnown RBP25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 POLR2MP0CAP2 368 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 SSR1P43307 286 aaKnown RBP25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 PHC3Q8NDX5 983 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 KIFAP3Q92845 792 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 SLC5A5Q92911 643 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 CCDC77Q9BR77 488 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 FBXO28Q9NVF7 368 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.45■■□□□ 1.672e-6■■□□□ 13.2
CSNK1E-203ENST00000396832 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.67
CSNK1E-203ENST00000396832 C10orf71Q711Q0 1435 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 GSTTP1A0A1W2PQM5 241 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 MARK3P27448 753 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 CCDC6Q16204 474 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 TAF1BQ53T94 588 aaPredicted RBP25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 ZCWPW1Q9H0M4 648 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 SEL1LQ9UBV2 794 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 SCOCQ9UIL1 159 aa25.45■■□□□ 1.66
CSNK1E-203ENST00000396832 TRAFD1O14545 582 aaPredicted RBP25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 CYP11B1P15538 503 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 VHLP40337 213 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 PEX3P56589 373 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 FAM43BQ6ZT52 329 aaPredicted RBP25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 CPA5Q8WXQ8 436 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 PTPN4P29074 926 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 RCN2Q14257 317 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 LMBRD2Q68DH5 695 aaPredicted RBP25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 SP8Q8IXZ3 490 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 XXYLT1Q8NBI6 393 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 FSCN2O14926 492 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 SOX10P56693 466 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 NFIL3Q16649 462 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 RFWD3Q6PCD5 774 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 TRAIPQ9BWF2 469 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 LRCH1Q9Y2L9 728 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 STK24Q9Y6E0 443 aa25.44■■□□□ 1.66
CSNK1E-203ENST00000396832 PCNTO95613 3336 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 SIGLEC16A6NMB1 481 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 ATF2P15336 505 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 MAPK4P31152 587 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 LAMB3Q13751 1172 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 C10orf82Q8WW14 230 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 MAML1Q92585 1016 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 GMCL1Q96IK5 515 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 CSRNP1Q96S65 589 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 TEKT3Q9BXF9 490 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 WDR11Q9BZH6 1224 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 PPP1R12CQ9BZL4 782 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 IRAK4Q9NWZ3 460 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 RPL26L1Q9UNX3 145 aaKnown RBP25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 EDF1O60869 148 aaKnown RBP25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 PTK6Q13882 451 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 STAT4Q14765 748 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 SNX30Q5VWJ9 437 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 FAM71AQ8IYT1 594 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 TAS1R2Q8TE23 839 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 PSPC1Q8WXF1 523 aaKnown RBP25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 IFT43Q96FT9 208 aa25.43■■□□□ 1.66
CSNK1E-203ENST00000396832 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 PIAS1O75925 651 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 RNF8O76064 485 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 MTA2O94776 668 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 ADRA2BP18089 450 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 RRM1P23921 792 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 PLA2G4FQ68DD2 849 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 C4orf50Q6ZRC1 276 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 MIER3Q7Z3K6 550 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 EURLQ9NYK6 297 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 LARSQ9P2J5 1176 aaKnown RBP25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 GRID1Q9ULK0 1009 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 HOXA10P31260 410 aaPredicted RBP25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 CAV1Q03135 178 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 SPARCL1Q14515 664 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms