RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 KCNN1Q92952 543 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 DDX27Q96GQ7 796 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 SNF8Q96H20 258 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.32
CCHCR1-202ENST00000396263 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 DNM1LO00429 736 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 RGS20O76081 388 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 CALCAP01258 141 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 WDR44Q5JSH3 913 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 MON1BQ7L1V2 547 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 CCDC114Q96M63 670 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 DCLK3Q9C098 648 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 JPH1Q9HDC5 661 aaPredicted RBP17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 ASIC3Q9UHC3 531 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.31
CCHCR1-202ENST00000396263 NEBLO76041 1014 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 PROSCO94903 275 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 NSFP46459 744 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 PRKCEQ02156 737 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 CAV1Q03135 178 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 SNX1Q13596 522 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 FAM228AQ86W67 206 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 CCDC60Q8IWA6 550 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 REPS2Q8NFH8 660 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 SERPINB12Q96P63 405 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 DDX23Q9BUQ8 820 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 SEPT9Q9UHD8 586 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 GAS8O95995 478 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 ITIH4Q14624 930 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 LLGL1Q15334 1064 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 CNGA2Q16280 664 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 EXOC3L1Q86VI1 746 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 CDHR1Q96JP9 859 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 PRMT1Q99873 361 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 HOMER3Q9NSC5 361 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 SLC9A2Q9UBY0 812 aa17.01■□□□□ 0.31
CCHCR1-202ENST00000396263 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 PSTPIP1O43586 416 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 CHKAP35790 457 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 SCTRP47872 440 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 LIG4P49917 911 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 OAZ1P54368 228 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 KLF1Q13351 362 aaPredicted RBP17■□□□□ 0.31
CCHCR1-202ENST00000396263 TDRD10Q5VZ19 366 aaKnown RBP17■□□□□ 0.31
CCHCR1-202ENST00000396263 ABHD15Q6UXT9 468 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 TRIM72Q6ZMU5 477 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 EGFL6Q8IUX8 553 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 ANKS4BQ8N8V4 417 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 ATL2Q8NHH9 583 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 ATG4AQ8WYN0 398 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 FAM84AQ96KN4 292 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 FNBP1Q96RU3 617 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 SIP14410 1827 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 PHIPQ8WWQ0 1821 aa17■□□□□ 0.31
CCHCR1-202ENST00000396263 ACO1P21399 889 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 BACE1P56817 501 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 DLK2Q6UY11 383 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 LRRC34Q8IZ02 419 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 KIRREL3Q8IZU9 778 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 VCPIP1Q96JH7 1222 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 NEU2Q9Y3R4 380 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 CCT8L1PA6NM43 557 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 SORBS3O60504 671 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 TTC4O95801 387 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 TNNI1P19237 187 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 PIK3CAP42336 1068 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 ITGA8P53708 1063 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 ACTR2P61160 394 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 LONRF1Q17RB8 773 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 LMBRD2Q68DH5 695 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 NAIF1Q69YI7 327 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
CCHCR1-202ENST00000396263 TCEA3O75764 348 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 STAM2O75886 525 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 ACSL3O95573 720 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 ATF2P15336 505 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 ATP5DP30049 168 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 WNT7BP56706 349 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 NLRP11P59045 1033 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 XKR3Q5GH77 459 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 LIN9Q5TKA1 542 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 DCAF15Q66K64 600 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 VNN1O95497 513 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 PIGRP01833 764 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 NOMO3P69849 1222 aa16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-202ENST00000396263 CUL2Q13617 745 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms