RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 SLC2A4RGQ9NR83 387 aa12.07□□□□□ -0.48
CNIH1-202ENST00000395573 CNTN3Q9P232 1028 aa12.07□□□□□ -0.48
CNIH1-202ENST00000395573 BACE2Q9Y5Z0 518 aa12.07□□□□□ -0.48
CNIH1-202ENST00000395573 EP300Q09472 2414 aaPredicted RBP12.07□□□□□ -0.48
CNIH1-202ENST00000395573 ABLIM1O14639 778 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 DCNP07585 359 aaKnown RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 PLS3P13797 630 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 KCNE1P15382 129 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 ELF1P32519 619 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 ARPP19P56211 112 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 ROR1Q01973 937 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 RTL10Q7L3V2 364 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 SYT2Q8N9I0 419 aaPredicted RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 KXD1Q9BQD3 176 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 NTPCRQ9BSD7 190 aaKnown RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 RPP25Q9BUL9 199 aaKnown RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 DNMT3BQ9UBC3 853 aaKnown RBP12.06□□□□□ -0.48
CNIH1-202ENST00000395573 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 SIT1Q9Y3P8 196 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 NUB1Q9Y5A7 615 aa12.06□□□□□ -0.48
CNIH1-202ENST00000395573 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 H7C4K7 107 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 PRRG1O14668 218 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 SYN3O14994 580 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 TOM1L1O75674 476 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 LRG1P02750 347 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 PLA2G4BP0C869 781 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 MAPTP10636 758 aaKnown RBP12.05□□□□□ -0.48
CNIH1-202ENST00000395573 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
CNIH1-202ENST00000395573 MCM4P33991 863 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 SLC12A3P55017 1021 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 GPC5P78333 572 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 SLC8B1Q6J4K2 584 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 NPAS3Q8IXF0 933 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 TMEM161BQ8NDZ6 487 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 ZNF461Q8TAF7 563 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 BICD1Q96G01 975 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 SHDQ96IW2 340 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 FOXQ1Q9C009 403 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 KCNH3Q9ULD8 1083 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 MRPS23Q9Y3D9 190 aaKnown RBP12.05□□□□□ -0.48
CNIH1-202ENST00000395573 F5P12259 2224 aa12.05□□□□□ -0.48
CNIH1-202ENST00000395573 ATG2BQ96BY7 2078 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 HELZP42694 1942 aaKnown RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 GREB1Q4ZG55 1949 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 ANAPC1Q9H1A4 1944 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 ARHGEF37A1IGU5 675 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 H0YCG3 227 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CLDN3O15551 220 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 ABLIM3O94929 683 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 RHOP08100 348 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CXCL8P10145 99 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 SLC10A6Q3KNW5 377 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CTXN3Q4LDR2 81 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 ARL6IP4Q66PJ3 421 aaKnown RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 SUSD3Q96L08 255 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 TBC1D32Q96NH3 1257 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CORO1BQ9BR76 489 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 CYP4F11Q9HBI6 524 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 LARSQ9P2J5 1176 aaKnown RBP12.04□□□□□ -0.48
CNIH1-202ENST00000395573 TUBGCP4Q9UGJ1 667 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
CNIH1-202ENST00000395573 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 ATF2P15336 505 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 CEBPBP17676 345 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 PTPN2P17706 415 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 STARD6P59095 220 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 SPAG1Q07617 926 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 MCL1Q07820 350 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
CNIH1-202ENST00000395573 MLF2Q15773 248 aaPredicted RBP12.03□□□□□ -0.48
CNIH1-202ENST00000395573 SLC5A9Q2M3M2 681 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 TPGS2Q68CL5 300 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 ZNF280DQ6N043 979 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 GPBP1Q86WP2 473 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 APPL2Q8NEU8 664 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 MCRS1Q96EZ8 462 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 AK8Q96MA6 479 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 REEP2Q9BRK0 252 aa12.03□□□□□ -0.48
CNIH1-202ENST00000395573 UPF2Q9HAU5 1272 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms