RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 RNF19AQ9NV58 838 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 CNTN6Q9UQ52 1028 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 HES2Q9Y543 173 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 C17orf102A2RUQ5 167 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 DARSP14868 501 aaKnown RBP20.41■□□□□ 0.86
CLDND1-203ENST00000394181 RNASE9P60153 205 aaKnown RBP20.41■□□□□ 0.86
CLDND1-203ENST00000394181 GPC5P78333 572 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 IFI16Q16666 785 aaKnown RBP20.41■□□□□ 0.86
CLDND1-203ENST00000394181 CLEC16AQ2KHT3 1053 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 DEFB115Q30KQ5 88 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 C2CD6Q53TS8 623 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 C7orf31Q8N865 590 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 CPA5Q8WXQ8 436 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 NXF1Q9UBU9 619 aaKnown RBP20.41■□□□□ 0.86
CLDND1-203ENST00000394181 STXBP5LQ9Y2K9 1186 aa20.41■□□□□ 0.86
CLDND1-203ENST00000394181 TBXAS1P24557 533 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-203ENST00000394181 CCND3P30281 292 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-203ENST00000394181 GJA9P57773 515 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 ZNF699Q32M78 642 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 NT5DC3Q86UY8 548 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 PASD1Q8IV76 773 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 CYFIP2Q96F07 1278 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 PNKPQ96T60 521 aa20.4■□□□□ 0.86
CLDND1-203ENST00000394181 KIF4AO95239 1232 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 ITGB3P05106 788 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 UNGP13051 313 aaPredicted RBP20.39■□□□□ 0.86
CLDND1-203ENST00000394181 EIF4BP23588 611 aaKnown RBP20.39■□□□□ 0.86
CLDND1-203ENST00000394181 ASPAP45381 313 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 RPS6KA1Q15418 735 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 ACAD10Q6JQN1 1059 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 PHLDB2Q86SQ0 1253 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 ACAP3Q96P50 834 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 NIF3L1Q9GZT8 377 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 SNTG2Q9NY99 539 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 CTTNBP2NLQ9P2B4 639 aa20.39■□□□□ 0.86
CLDND1-203ENST00000394181 MYCNP04198 464 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-203ENST00000394181 GNA15P30679 374 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 HOXC8P31273 242 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 RAP1GAPP47736 663 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 CLCN6P51797 869 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 LLGL2Q6P1M3 1020 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 PEX26Q7Z412 305 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 ZSWIM1Q9BR11 485 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 ABCB6Q9NP58 842 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 CISHQ9NSE2 258 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 TSKSQ9UJT2 592 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 MROH7Q68CQ1 1323 aa20.39■□□□□ 0.85
CLDND1-203ENST00000394181 KCNK3O14649 394 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF132P52740 706 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 CDH8P55286 799 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 SP3Q02447 781 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 CKAP4Q07065 602 aaKnown RBP20.38■□□□□ 0.85
CLDND1-203ENST00000394181 SNX17Q15036 470 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 NBPF20Q3BBV1 942 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 BTBD6Q96KE9 485 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 ADPGKQ9BRR6 497 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 TRPA1O75762 1119 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 MRPS25P82663 173 aaKnown RBP20.38■□□□□ 0.85
CLDND1-203ENST00000394181 WDR72Q3MJ13 1102 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 NAA35Q5VZE5 725 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 CPNE8Q86YQ8 564 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF446Q9NWS9 450 aa20.38■□□□□ 0.85
CLDND1-203ENST00000394181 SEPT4O43236 478 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 GRM5P41594 1212 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 BPIFB4P59827 614 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 SPATA4Q8NEY3 305 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 WNT8BQ93098 351 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF653Q96CK0 615 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 ZMAT2Q96NC0 199 aaKnown RBP20.37■□□□□ 0.85
CLDND1-203ENST00000394181 HINFPQ9BQA5 517 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 MTG1Q9BT17 334 aaPredicted RBP20.37■□□□□ 0.85
CLDND1-203ENST00000394181 SDCBP2Q9H190 292 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 ASB7Q9H672 318 aa20.37■□□□□ 0.85
CLDND1-203ENST00000394181 TMEM110-MUSTN1A8MSY1 372 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 THAP12O43422 761 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 CDC42EP1Q00587 391 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 TMEM132DQ14C87 1099 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 SLC27A1Q6PCB7 646 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 NXF3Q9H4D5 531 aaKnown RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 CYP1A1P04798 512 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 CYP1A2P05177 515 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 PRKAR2AP13861 404 aaKnown RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 POLR2BP30876 1174 aaKnown RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 ORC1Q13415 861 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 GDF6Q6KF10 455 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF572Q7Z3I7 529 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF606Q8WXB4 792 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 HES6Q96HZ4 224 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 NUP85Q9BW27 656 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 UPF3AQ9H1J1 476 aaKnown RBP20.36■□□□□ 0.85
CLDND1-203ENST00000394181 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
CLDND1-203ENST00000394181 RARBP10826 455 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 AKAP5P24588 427 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 BRD2P25440 801 aaKnown RBP20.35■□□□□ 0.85
CLDND1-203ENST00000394181 ZNF677Q86XU0 584 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 RHOT2Q8IXI1 618 aa20.35■□□□□ 0.85
CLDND1-203ENST00000394181 MCOLN2Q8IZK6 566 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms