RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GSCP56915 257 aaPredicted RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 ZNF844Q08AG5 666 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 TFDP1Q14186 410 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 FAM47EQ6ZV65 393 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 C7orf31Q8N865 590 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 EPS8L3Q8TE67 593 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 GBP5Q96PP8 586 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 A1CFQ9NQ94 594 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 A0A1B0GUL6 1792 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 H7C0C1 242 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MAFGO15525 162 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 CSDE1O75534 798 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 GZMAP12544 262 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 ATP5OP48047 213 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 NLRP11P59045 1033 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 ORC1Q13415 861 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MYBPC2Q14324 1141 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 KRT81Q14533 505 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 R3HDM1Q15032 1099 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 ZNF667Q5HYK9 610 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 FKBP1CQ5VVH2 108 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 IZUMO3Q5VZ72 239 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 CEP128Q6ZU80 1094 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 TMC3Q7Z5M5 1100 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MORC4Q8TE76 937 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 SEMA4DQ92854 862 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MCEEQ96PE7 176 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 MRPL4Q9BYD3 311 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 RPS6KA5O75582 802 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 OATP04181 439 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 GTF2H1P32780 548 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 PTGER2P43116 358 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 GPS1Q13098 491 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 BBS9Q3SYG4 887 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 LRRC57Q8N9N7 239 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 BBOF1Q8ND07 529 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 OSBPL8Q9BZF1 889 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
CALD1-203ENST00000393118 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
CALD1-203ENST00000393118 SYNJ2BP-COX16A0A087WUM0 186 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 PGK2P07205 417 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 BRAFP15056 766 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 TBXAS1P24557 533 aaPredicted RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 HSD17B4P51659 736 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 GTF2BQ00403 316 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 OR6B2Q6IFH4 312 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 VSIG10LQ86VR7 867 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 RNF168Q8IYW5 571 aaPredicted RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 MYCBPAPQ8TBZ2 947 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 SNF8Q96H20 258 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 ADPGKQ9BRR6 497 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 COX16Q9P0S2 106 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 CPP00450 1065 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 PRKCBP05771 671 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 KRT10P13645 584 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 RPL21P46778 160 aaKnown RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 ZNF131P52739 623 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 JAM2P57087 298 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 LMNB2Q03252 620 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 KIF22Q14807 665 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 PREPLQ4J6C6 727 aaPredicted RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 CHMP6Q96FZ7 201 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 PCDHB18PQ96TA0 734 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 NEUROG2Q9H2A3 272 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 COG5Q9UP83 839 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 TJP3O95049 919 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 SUPT20HL2P0C7V6 817 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 RARAP10276 462 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 P4HA1P13674 534 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 GPC3P51654 580 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 ITGA8P53708 1063 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 CYP4A22Q5TCH4 519 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 MAP4K3Q8IVH8 894 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 MSL3Q8N5Y2 521 aaKnown RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 KREMEN1Q96MU8 473 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 OSBPL1AQ9BXW6 950 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms