RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PDGFRBP09619 1106 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CCNB1P14635 433 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PDE6AP16499 860 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 LONP1P36776 959 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 OTUD4Q01804 1114 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PTPAQ15257 358 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CLPPQ16740 277 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF423Q2M1K9 1284 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ANKDD1AQ495B1 522 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ACSBG2Q5FVE4 666 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 C10orf76Q5T2E6 689 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 WDR59Q6PJI9 974 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 TRMT10CQ7L0Y3 403 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 RNF169Q8NCN4 708 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 STARD8Q92502 1023 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GATA6Q92908 595 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 MRPS26Q9BYN8 205 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GOLPH3Q9H4A6 298 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ARMC7Q9H6L4 198 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ANAPC5Q9UJX4 755 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 AP4S1Q9Y587 144 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PCDHGA3Q9Y5H0 932 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 SSU72P8A0A1W2PR75 194 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 LRRC10BA6NIK2 292 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 MTRF1O75570 445 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 APBA3O96018 575 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 KRT7P08729 469 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 VCLP18206 1134 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GSSP48637 474 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PMS1P54277 932 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 NCKAP1LP55160 1127 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PTK2BQ14289 1009 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 NAB2Q15742 525 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CYB5R4Q7L1T6 521 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GOLM1Q8NBJ4 401 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PLEKHO2Q8TD55 490 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 GLG1Q92896 1179 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PPWD1Q96BP3 646 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 TRIM39Q9HCM9 518 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CD209Q9NNX6 404 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 VTA1Q9NP79 307 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 CNOT7Q9UIV1 285 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 TNFAIP3P21580 790 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 USP11P51784 963 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 DPYDQ12882 1025 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 OVGP1Q12889 678 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 MEA1Q16626 185 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 SLC45A4Q5BKX6 768 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 IFIT1BQ5T764 474 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 APOA5Q6Q788 366 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 JAMLQ86YT9 394 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 MARCH10Q8NA82 808 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 EBF3Q9H4W6 596 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 WARS2Q9UGM6 360 aaKnown RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 PDS5AQ29RF7 1337 aaKnown RBP8.02□□□□□ -1.12
VTI1A-201ENST00000393077 MROH7Q68CQ1 1323 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 KIF13AQ9H1H9 1805 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8QA0A0J9YX86 632 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8OA6NCC3 632 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8NF8WBI6 632 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8RI6L899 631 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 ASNA1O43681 348 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 PHF2O75151 1096 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GUCY1B2O75343 617 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 CIAO1O76071 339 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 MMP1P03956 469 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 CDK4P11802 303 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 RXRGP48443 463 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF200P98182 395 aaPredicted RBP8.02□□□□□ -1.12
VTI1A-201ENST00000393077 LLGL1Q15334 1064 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 RFWD3Q6PCD5 774 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 PIK3AP1Q6ZUJ8 805 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF804AQ7Z570 1209 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 IFNLR1Q8IU57 520 aaPredicted RBP8.02□□□□□ -1.12
VTI1A-201ENST00000393077 OSBP2Q969R2 916 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 SRPK1Q96SB4 655 aaKnown RBP8.02□□□□□ -1.12
VTI1A-201ENST00000393077 TRABDQ9H4I3 376 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 CNNM2Q9H8M5 875 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 ARHGAP20Q9P2F6 1191 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.12
VTI1A-201ENST00000393077 MTO1Q9Y2Z2 717 aaKnown RBP8.02□□□□□ -1.12
VTI1A-201ENST00000393077 ZSCAN5BA6NJL1 495 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ERVV-1B6SEH8 477 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 NOP56O00567 594 aaKnown RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 GSC2O15499 205 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 FOSL1P15407 271 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 PSMC3P17980 439 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 RASA1P20936 1047 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 PTGS2P35354 604 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SLC5A3P53794 718 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms