RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RTL10Q7L3V2 364 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 GPR149Q86SP6 731 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 GPD1LQ8N335 351 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-203ENST00000391855 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 EXOC1Q9NV70 894 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 FBXW11Q9UKB1 542 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 NR2E1Q9Y466 385 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-203ENST00000391855 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 TCHHQ07283 1943 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
GGPS1-203ENST00000391855 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 LOC730098B7Z3J9 87 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 TGM5O43548 720 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 NFICP08651 508 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 HOXA9P31269 272 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 NDUFA8P51970 172 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 RAB33AQ14088 237 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 KANK3Q6NY19 840 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CRELD2Q6UXH1 353 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 PALB2Q86YC2 1186 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 KREMEN2Q8NCW0 462 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 GOLGA5Q8TBA6 731 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CBWD1Q9BRT8 395 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 APOL5Q9BWW9 433 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 RBAKQ9NYW8 714 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 ANK1P16157 1881 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 I3L4J1 428 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 M0QZQ0 153 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 ZMYND10O75800 440 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 KIF20AO95235 890 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 POU2F2P09086 479 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 ALADP13716 330 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 KRBA2Q6ZNG9 492 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CCDC149Q6ZUS6 474 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 C12orf76Q8N812 135 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-203ENST00000391855 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 SCFD1Q8WVM8 642 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 SAAL1Q96ER3 474 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 IKZF4Q9H2S9 585 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CD320Q9NPF0 282 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 USTQ9Y2C2 406 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
GGPS1-203ENST00000391855 SPTBN5Q9NRC6 3674 aaKnown RBP13.72□□□□□ -0.21
GGPS1-203ENST00000391855 CUL9Q8IWT3 2517 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 KLRC4O43908 158 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 HNRNPA1P09651 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
GGPS1-203ENST00000391855 ODC1P11926 461 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 TYMPP19971 482 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 CASP1P29466 404 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 OR1D2P34982 312 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
GGPS1-203ENST00000391855 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 C9orf57Q5W0N0 161 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 DSTYKQ6XUX3 929 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 C12orf56Q8IXR9 622 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 GRAMD1CQ8IYS0 662 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
GGPS1-203ENST00000391855 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 C1QTNF1Q9BXJ1 281 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 POMKQ9H5K3 350 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 AGPAT3Q9NRZ7 376 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
GGPS1-203ENST00000391855 DENND4AQ7Z401 1863 aa13.71□□□□□ -0.21
GGPS1-203ENST00000391855 MTCL1Q9Y4B5 1905 aaKnown RBP13.71□□□□□ -0.21
GGPS1-203ENST00000391855 NCOR1O75376 2440 aa13.71□□□□□ -0.21
GGPS1-203ENST00000391855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 CCDC195A0A1B0GUA6 201 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 ZNF233A6NK53 670 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 PIRO00625 290 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 DCXO43602 365 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 ZNF202O95125 648 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 PNPLA4P41247 253 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 TAF6P49848 677 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 GUCY2FP51841 1108 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 YWHAHQ04917 246 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.22
GGPS1-203ENST00000391855 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.22
GGPS1-203ENST00000391855 TPGS2Q68CL5 300 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms