RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SERPINB8P50452 374 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 THNSL1Q8IYQ7 743 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 SLC25A41Q8N5S1 370 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 TMEM120AQ9BXJ8 343 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 USE1Q9NZ43 259 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 H0YC42 278 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 KCNJ1P48048 391 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 ABCB11O95342 1321 aa16.94■□□□□ 0.3
SHANK1-204ENST00000391814 ASNA1O43681 348 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 AARS2Q5JTZ9 985 aaKnown RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 FAM102AQ5T9C2 384 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 TRAPPC9Q96Q05 1148 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 C6orf203Q9P0P8 240 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 TRADDQ15628 312 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 FAM111AQ96PZ2 611 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 TMEM237Q96Q45 408 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 ADGRA3Q8IWK6 1321 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 CCDC78A2IDD5 438 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 O00370 1275 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 PLEKP08567 350 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 PYGMP11217 842 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 ADSSL1Q8N142 457 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 RNF103O00237 685 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 CAPN1P07384 714 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 APRTP07741 180 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 SDC4P31431 198 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 C18orf8Q96DM3 657 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 NOL6Q9H6R4 1146 aaKnown RBP16.93■□□□□ 0.3
SHANK1-204ENST00000391814 ZNF556Q9HAH1 456 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 L1RE1Q9UN81 338 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 SASH3O75995 380 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 CIITAP33076 1130 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 CYFIP1Q7L576 1253 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 BNIPLQ7Z465 357 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 HDDC2Q7Z4H3 204 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 PCYOX1LQ8NBM8 494 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 WNK4Q96J92 1243 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
SHANK1-204ENST00000391814 SSU72P8A0A1W2PR75 194 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 RGS5O15539 181 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 COMTP21964 271 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ANXA13P27216 316 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 HMOX2P30519 316 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 SNX30Q5VWJ9 437 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 MTHFD1LQ6UB35 978 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 TRIM8Q9BZR9 551 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 SOX6P35712 828 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 SERPINB9P50453 376 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 TMEM161AQ9NX61 479 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ADGRA2Q96PE1 1338 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ARHGEF26Q96DR7 871 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 PAIP1Q9H074 479 aaKnown RBP16.92■□□□□ 0.3
SHANK1-204ENST00000391814 BTBD7Q9P203 1132 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 AP5Z1O43299 807 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 TMEM245Q9H330 911 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ZNF839A8K0R7 811 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 MEI4A8MW99 385 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 RASSF9O75901 435 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 CALB2P22676 271 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ST13P50502 369 aaKnown RBP16.92■□□□□ 0.3
SHANK1-204ENST00000391814 ITPRIPL1Q6GPH6 555 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 GDPD5Q8WTR4 605 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 SNX13Q9Y5W8 968 aa16.92■□□□□ 0.3
SHANK1-204ENST00000391814 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TAS2R42Q7RTR8 314 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ARID3BQ8IVW6 561 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TUBE1Q9UJT0 475 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 IQCA1LA6NCM1 817 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 PRPF4O43172 522 aaKnown RBP eCLIP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TAP1Q03518 808 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TMEM79Q9BSE2 394 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 MAGEB5Q9BZ81 275 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 NDFIP2Q9NV92 336 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ZSCAN32Q9NX65 697 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 BFARQ9NZS9 450 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TPST1O60507 370 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 FKBP9O95302 570 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TDP2O95551 362 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP10Q14694 798 aaKnown RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 MROH9Q5TGP6 573 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 FKBP9P1Q75LS8 142 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 STK33Q9BYT3 514 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 RAB6BQ9NRW1 208 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms