RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 TATDN2Q93075 761 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 CLGNO14967 610 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 KCNN4O15554 427 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 ZWINTO95229 277 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 SEPT6Q14141 434 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 RYBPQ8N488 228 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-202ENST00000391611 ACAP3Q96P50 834 aa13.68□□□□□ -0.22
PCNX4-202ENST00000391611 KLHL8Q9P2G9 620 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-202ENST00000391611 SHBGP04278 402 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 RARAP10276 462 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 BRD2P25440 801 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 ECM1Q16610 540 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 CCNYL1Q8N7R7 359 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 ARMC2Q8NEN0 867 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 TBX20Q9UMR3 447 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SMG5Q9UPR3 1016 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SLC4A7Q9Y6M7 1214 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 PFDN1O60925 122 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 FNTAP49354 379 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SKOR1P84550 965 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 ORC1Q13415 861 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SHCBP1LQ9BZQ2 653 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SENP1Q9P0U3 644 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 XPO7Q9UIA9 1087 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SLITRK3O94933 977 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 NQO1P15559 274 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 CCND1P24385 295 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 TYK2P29597 1187 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 SV2AQ7L0J3 742 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 CEP120Q8N960 986 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 C1orf131Q8NDD1 294 aaKnown RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
PCNX4-202ENST00000391611 PSMC3IPQ9P2W1 217 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-202ENST00000391611 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 KRT34O76011 436 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 MX2P20592 715 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 ABCD1P33897 745 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 FAM71DQ8N9W8 422 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 SPATA18Q8TC71 538 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 ANLNQ9NQW6 1124 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 FAF1Q9UNN5 650 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 B2RBV5 119 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 CASP2P42575 452 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 PRKCEQ02156 737 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 ANKRD20A8PQ5CZ79 823 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 JADE1Q6IE81 842 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 FEZF2Q8TBJ5 459 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 STAMBPL1Q96FJ0 436 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 STAT5BP51692 787 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 PLCB4Q15147 1175 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 SIX6OS1Q8N1H7 587 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 EXT2Q93063 718 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 LRGUKQ96M69 825 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 VCX3AQ9NNX9 186 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
PCNX4-202ENST00000391611 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 BCL9O00512 1426 aa13.66□□□□□ -0.22
PCNX4-202ENST00000391611 TLR2O60603 784 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 MARCKSL1P49006 195 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 PPATQ06203 517 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 SLC12A1Q13621 1099 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 HEATR6Q6AI08 1181 aaKnown RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 RTKN2Q8IZC4 609 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 AGGF1Q8N302 714 aaeCLIP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 CCDC33Q8N5R6 958 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-202ENST00000391611 NAALADL1Q9UQQ1 740 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 AFF2P51816 1311 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 NFIBO00712 420 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 TRAPPC3O43617 180 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 CDC25CP30307 473 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 FLT3P36888 993 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 NPTX2P47972 431 aa13.65□□□□□ -0.22
PCNX4-202ENST00000391611 IQCKQ8N0W5 287 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms