RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PRDM5Q9NQX1 630 aaPredicted RBP7.16□□□□□ -1.26
TRAV35-201ENST00000390462 RIC8BQ9NVN3 520 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 RGL1Q9NZL6 768 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 TMOD4Q9NZQ9 345 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 SEL1LQ9UBV2 794 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 SYNPO2Q9UMS6 1093 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PCDHA1Q9Y5I3 950 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 SNX8Q9Y5X2 465 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 PASKQ96RG2 1323 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
TRAV35-201ENST00000390462 C17orf113A0A1B0GUU1 675 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 PRAMEF25A6NGN4 478 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 KRIT1O00522 736 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 AP3D1O14617 1153 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 PCDH8O95206 1070 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 WISP1O95388 367 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 KRT1P04264 644 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 MMEP08473 750 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ACADMP11310 421 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 RXRAP19793 462 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 MAPK4P31152 587 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 KIF5BP33176 963 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ABCD1P33897 745 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 AARSP49588 968 aaKnown RBP eCLIP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ARFIP2P53365 341 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 PNLIPRP1P54315 467 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 EPHA5P54756 1037 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 FSTL1Q12841 308 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ADAM9Q13443 819 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ACVR2BQ13705 512 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 NOMO1Q15155 1222 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ASIC2Q16515 512 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ATP2B3Q16720 1220 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ARHGAP15Q53QZ3 475 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 SFRP5Q5T4F7 317 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 SNX30Q5VWJ9 437 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 RRAGBQ5VZM2 374 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 NFRKBQ6P4R8 1299 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 R3HCC1LQ7Z5L2 792 aaKnown RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 NBPF11Q86T75 865 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 GATAD2AQ86YP4 633 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 PLD6Q8N2A8 252 aaKnown RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 GLB1L3Q8NCI6 653 aaPredicted RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 TOR1AIP2Q8NFQ8 470 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 BRIX1Q8TDN6 353 aaKnown RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ASB15Q8WXK1 588 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 SDCCAG3Q96C92 435 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 LRRC46Q96FV0 321 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 PPP1R9BQ96SB3 815 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 TRIM54Q9BYV2 358 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 ACSS3Q9H6R3 686 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 SPON1Q9HCB6 807 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 RBM12Q9NTZ6 932 aaKnown RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 TDP1Q9NUW8 608 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 MARCH2Q9P0N8 246 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 TBX20Q9UMR3 447 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 USP18Q9UMW8 372 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 C19orf53Q9UNZ5 99 aaPredicted RBP7.15□□□□□ -1.26
TRAV35-201ENST00000390462 CYP46A1Q9Y6A2 500 aa7.15□□□□□ -1.26
TRAV35-201ENST00000390462 IQGAP2Q13576 1575 aa7.15□□□□□ -1.27
TRAV35-201ENST00000390462 C22orf46C9J442 243 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 GOLGA6L22H0YM25 854 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 M0R082 166 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 TBCAO75347 108 aaKnown RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 TK1P04183 234 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 RAB6AP20340 208 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 GABRB3P28472 473 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 FLT3LGP49771 235 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 HSPA2P54652 639 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 PCBP3P57721 371 aaKnown RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CDC42EP1Q00587 391 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 KRT76Q01546 638 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CTXN3Q4LDR2 81 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 ARL6IP4Q66PJ3 421 aaKnown RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CPLX2Q6PUV4 134 aaKnown RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CYP2R1Q6VVX0 501 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 UNC13DQ70J99 1090 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CHSY3Q70JA7 882 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 DNAJB7Q7Z6W7 309 aaPredicted RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 TSPYL5Q86VY4 417 aaPredicted RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 TOP6BLQ8N6T0 577 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 NAT16Q8N8M0 369 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 AVL9Q8NBF6 648 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CCDC150Q8NCX0 1101 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 NLGN2Q8NFZ4 835 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 OR6B3Q8NGW1 331 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 ZNF417Q8TAU3 575 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 MAML1Q92585 1016 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 MRGPRX4Q96LA9 322 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 ZNF587Q96SQ5 575 aaPredicted RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 P2RX7Q99572 595 aaKnown RBP7.14□□□□□ -1.27
TRAV35-201ENST00000390462 MXD3Q9BW11 206 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 CDADC1Q9BWV3 514 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 MAGEB5Q9BZ81 275 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 GPR62Q9BZJ7 368 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 OR10A4Q9H209 315 aa7.14□□□□□ -1.27
TRAV35-201ENST00000390462 PABPC3Q9H361 631 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms