RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 PHF20Q9BVI0 1012 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 RPAP3Q9H6T3 665 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 GGA1Q9UJY5 639 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CDYLQ9Y232 598 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CLCN2P51788 898 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 TOP3AQ13472 1001 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 EFHC2Q5JST6 749 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 MDM1Q8TC05 714 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 PRDM8Q9NQV8 689 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 PTCH1Q13635 1447 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 TRAPPC3O43617 180 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 SASH1O94885 1247 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 HNRNPH2P55795 449 aaKnown RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CHRNB3Q05901 458 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 SPAG16Q8N0X2 631 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CCT8L1PA6NM43 557 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 BCL10O95999 233 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ZNF174Q15697 407 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 BTBD3Q9Y2F9 522 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 PCDHB4Q9Y5E5 795 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 V9GY48 417 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 IL2RBP14784 551 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 EIF4A3P38919 411 aaKnown RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 PIGHQ14442 188 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ME3Q16798 604 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 FAM83EQ2M2I3 478 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 SUGT1Q9Y2Z0 365 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 DNALI1O14645 258 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ERN1O75460 977 aaKnown RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 MBD4O95243 580 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 RPSAP08865 295 aaKnown RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 EFR3AQ14156 821 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 KCTD16Q68DU8 428 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 MYLK4Q86YV6 388 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 SLC22A9Q8IVM8 553 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 FAM20AQ96MK3 541 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ALDH8A1Q9H2A2 487 aaPredicted RBP10.34□□□□□ -0.75
VLDLR-203ENST00000382100 TMX1Q9H3N1 280 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 NCAM1P13591 858 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 STK4Q13043 487 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 FAM160B2Q86V87 743 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CLEC4FQ8N1N0 589 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ELMOD1Q8N336 334 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 KLHL4Q9C0H6 718 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 ASAP1Q9ULH1 1129 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 CACNA1DQ01668 2161 aa10.34□□□□□ -0.75
VLDLR-203ENST00000382100 AHCYL1O43865 530 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 USP39Q53GS9 565 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 WDR93Q6P2C0 686 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 UNC13DQ70J99 1090 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 BBS2Q9BXC9 721 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 STAT3P40763 770 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CDH6P55285 790 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CUL4AQ13619 759 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 C12orf60Q5U649 245 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ABRAXAS1Q6UWZ7 409 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CCT8L2Q96SF2 557 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 KLHL28Q9NXS3 571 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ZBTB39O15060 712 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 TYK2P29597 1187 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 SNAP47Q5SQN1 464 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 RC3H1Q5TC82 1133 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ZCCHC8Q6NZY4 707 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 FBXO38Q6PIJ6 1188 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 PNPT1Q8TCS8 783 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 THRSPQ92748 146 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 OMA1Q96E52 524 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 GPAMQ9HCL2 828 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CSADQ9Y600 493 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 RALAP11233 206 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 PRLRP16471 622 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 WASHC2DQ5SRD0 308 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ANGPTL8Q6UXH0 198 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 KRT77Q7Z794 578 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 LRRC6Q86X45 466 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ERO1BQ86YB8 467 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 FNIP1Q8TF40 1166 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ARHGEF5Q12774 1597 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CDC42BPGQ6DT37 1551 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CDH18Q13634 790 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 XAGE3Q8WTP9 111 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ITGB6P18564 788 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ACAT1P24752 427 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 SKIV2L2P42285 1042 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 MAGEA4P43358 317 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 TUFMP49411 452 aaKnown RBP10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ACTR2P61160 394 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 CNTN1Q12860 1018 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 ARHGAP22Q7Z5H3 698 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 AHI1Q8N157 1196 aa10.33□□□□□ -0.76
VLDLR-203ENST00000382100 XXYLT1Q8NBI6 393 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms