RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 UNC45AQ9H3U1 944 aa20.08■□□□□ 0.8
SMARCD1-201ENST00000381513 SMYD3Q9H7B4 428 aa20.08■□□□□ 0.8
SMARCD1-201ENST00000381513 MKNK2Q9HBH9 465 aa20.08■□□□□ 0.8
SMARCD1-201ENST00000381513 USP29Q9HBJ7 922 aa20.08■□□□□ 0.8
SMARCD1-201ENST00000381513 BCS1LQ9Y276 419 aa20.08■□□□□ 0.8
SMARCD1-201ENST00000381513 DNAJC6O75061 913 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 CHN2P52757 468 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 KCTD21Q4G0X4 260 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 KLHL35Q6PF15 583 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 TSHZ1Q6ZSZ6 1077 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 CCDC80Q76M96 950 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 GSTA5Q7RTV2 222 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 NLRP10Q86W26 655 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 TSSK1BQ9BXA7 367 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 RRM1P23921 792 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 BTG3Q14201 252 aaPredicted RBP20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 IZUMO3Q5VZ72 239 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 RBM15BQ8NDT2 890 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 SLC20A1Q8WUM9 679 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 SLC35C1Q96A29 364 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 PPP1R14BQ96C90 147 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 CFAP57Q96MR6 1250 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 MCM9Q9NXL9 1143 aa20.07■□□□□ 0.8
SMARCD1-201ENST00000381513 VILLO15195 856 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 PIAS1O75925 651 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 FXR2P51116 673 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TRIM28Q13263 835 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 RASA2Q15283 850 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TRIP10Q15642 601 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 CYP1B1Q16678 543 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 PIP4K2CQ8TBX8 421 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 MTMR9Q96QG7 549 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 WNT8AQ9H1J5 351 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 F8W8V4 182 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 PRPF4O43172 522 aaKnown RBP eCLIP20.06■□□□□ 0.82e-8■■■■■ 35.8
SMARCD1-201ENST00000381513 RPL5P46777 297 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 CDK16Q00536 496 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 NCOA4Q13772 614 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 ACAP1Q15027 740 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TREML1Q86YW5 311 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 ULK2Q8IYT8 1036 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 KLHL4Q9C0H6 718 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 NMUR2Q9GZQ4 415 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 INIPQ9NRY2 104 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 PPARGC1AQ9UBK2 798 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 C15orf38-AP3S2A0A0A6YYH1 394 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 NDC80O14777 642 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 CALUO43852 315 aaPredicted RBP20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 PDE8AO60658 829 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 MYL2P10916 166 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 GPC5P78333 572 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 GRM4Q14833 912 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 NADK2Q4G0N4 442 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 ARPINQ7Z6K5 226 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TMPRSS6Q8IU80 811 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 ZNF398Q8TD17 642 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 MANSC1Q9H8J5 431 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 CYLDQ9NQC7 956 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 TBC1D30Q9Y2I9 924 aa20.06■□□□□ 0.8
SMARCD1-201ENST00000381513 POTEB3A0JP26 581 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 POTECB2RU33 542 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 NR3C1P04150 777 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 SERPINB6P35237 376 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 HOXD12P35452 270 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 GYG1P46976 350 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 CD97P48960 835 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 KNOP1Q1ED39 458 aaKnown RBP20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 POTEBQ6S5H4 581 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 PDSS2Q86YH6 399 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 PLVAPQ9BX97 442 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 HEMGNQ9BXL5 484 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 LRRC19Q9H756 370 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 SLC7A8Q9UHI5 535 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 TMEM119Q4V9L6 283 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 C11orf63Q6NUN7 778 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 NET1Q7Z628 596 aaPredicted RBP20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 ALYREFQ86V81 257 aaKnown RBP20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 TRIM50Q86XT4 487 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 BRD8Q9H0E9 1235 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 DOLKQ9UPQ8 538 aa20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 MTO1Q9Y2Z2 717 aaKnown RBP20.05■□□□□ 0.8
SMARCD1-201ENST00000381513 CCDC88AQ3V6T2 1871 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 YY1P25490 414 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 ACTR3P61158 418 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 GSTCDQ8NEC7 633 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 CCDC124Q96CT7 223 aaKnown RBP20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 BCRP11274 1271 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 PEX2P28328 305 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 GTF2H1P32780 548 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 GPSM2P81274 684 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 CAV1Q03135 178 aa20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 SIX1Q15475 284 aaPredicted RBP20.04■□□□□ 0.8
SMARCD1-201ENST00000381513 DHDDSQ86SQ9 333 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms