RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 PCDHB6Q9Y5E3 794 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RBBP6Q7Z6E9 1792 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ATRNO75882 1429 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 HGSO14964 777 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TP73O15350 636 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TEX28O15482 410 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 AQP9O43315 295 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TCEA3O75764 348 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF12P17014 697 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 AMPD1P23109 780 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 CD300CQ08708 224 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 NONOQ15233 471 aaKnown RBP eCLIP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TMEM266Q2M3C6 531 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 SLC45A4Q5BKX6 768 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 CCDC174Q6PII3 467 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 DYMQ7RTS9 669 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 MAPKAPK5Q8IW41 473 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 KLHL7Q8IXQ5 586 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PPFIBP2Q8ND30 876 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 OR7G1Q8NGA0 311 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PIP4K2CQ8TBX8 421 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 HPS3Q969F9 1004 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 SDCCAG3Q96C92 435 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 SHISA4Q96DD7 197 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ERP44Q9BS26 406 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ROPN1BQ9BZX4 212 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 FOXP1Q9H334 677 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ROPN1Q9HAT0 212 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 ZMAT5Q9UDW3 170 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PADI4Q9UM07 663 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 NUP188Q5SRE5 1749 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 DYTNA2CJ06 578 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 CDK2AP1O14519 115 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RGS16O15492 202 aaPredicted RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RIPK2O43353 540 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 DENRO43583 198 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 DCTN3O75935 186 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 BAIAP3O94812 1187 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 IL4RP24394 825 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PON1P27169 355 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RASSF2P50749 326 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 CHN2P52757 468 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 AP3M2P53677 418 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 NR1D2Q14995 579 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 GPR162Q16538 588 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PPP2R2DQ66LE6 453 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 OR6Y1Q8NGX8 325 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 RASGRP4Q8TDF6 673 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 TGS1Q96RS0 853 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PRPF18Q99633 342 aaKnown RBP6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PARVBQ9HBI1 364 aa6.95□□□□□ -1.3
RIPK1-202ENST00000380409 PFASO15067 1338 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 C2CD2LO14523 706 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 PSMA7O14818 248 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 CASQ2O14958 399 aaPredicted RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 KLRC4O43908 158 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 DNAJC6O75061 913 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 TUBA1BP68363 451 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 IFITM2Q01629 132 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 SNAPC2Q13487 334 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 SLC29A2Q14542 456 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 EFTUD2Q15029 972 aaKnown RBP eCLIP6.94□□□□□ -1.33e-6■■■■□ 23.5
RIPK1-202ENST00000380409 C4orf46Q504U0 113 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 SFT2D3Q587I9 215 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 RILPL1Q5EBL4 403 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 TUBA1AQ71U36 451 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 TAOK1Q7L7X3 1001 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 NET1Q7Z628 596 aaPredicted RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 CLNKQ7Z7G1 428 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 ATP6V0D2Q8N8Y2 350 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 GIPC3Q8TF64 312 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 ZFRQ96KR1 1074 aaKnown RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 CEP295NLQ96MC4 621 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 LRRC37BQ96QE4 947 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 PHF12Q96QT6 1004 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 MRPS26Q9BYN8 205 aaKnown RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 INO80BQ9C086 356 aaPredicted RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 RPAP3Q9H6T3 665 aaPredicted RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF287Q9HBT7 754 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.94□□□□□ -1.31e-8■■■□□ 18.2
RIPK1-202ENST00000380409 PKD2L1Q9P0L9 805 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 SEL1LQ9UBV2 794 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 SRP68Q9UHB9 627 aaKnown RBP6.94□□□□□ -1.3
RIPK1-202ENST00000380409 LGALS13Q9UHV8 139 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 CDH7Q9ULB5 785 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 ADCY3O60266 1144 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 MAGEC1O60732 1142 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 FTCDO95954 541 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 MSL3P1P0C860 447 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 ITGA4P13612 1032 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 NAGAP17050 411 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 KLRC1P26715 233 aa6.94□□□□□ -1.3
RIPK1-202ENST00000380409 STX2P32856 288 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms