RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SH3GL2Q99962 352 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 AP1M1Q9BXS5 423 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ZCCHC17Q9NP64 241 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 ERAP1Q9NZ08 941 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 CNOT8Q9UFF9 292 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 UTP11Q9Y3A2 253 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-201ENST00000379340 MCM3APO60318 1980 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 SOX1O00570 391 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 ABLIM1O14639 778 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MAGEB2O15479 319 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 SPOPO43791 374 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM189A1O60320 539 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 GH1P01241 217 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 EDN1P05305 212 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PROZP22891 400 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 CHRNA3P32297 505 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 GBP1P32455 592 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 GGCXP38435 758 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 HSPA9P38646 679 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PEX5P50542 639 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 WNT7BP56706 349 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 YWHAEP62258 255 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MESDQ14696 234 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PTPROQ16827 1216 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF792Q3KQV3 632 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 CD302Q8IX05 232 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 UBR7Q8N806 425 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 BRI3BPQ8WY22 251 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 IFT81Q8WYA0 676 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 TCHPQ9BT92 498 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 DDX47Q9H0S4 455 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PRO3102Q9H379 93 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 FZD8Q9H461 694 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 CPSF3Q9UKF6 684 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PCDHB4Q9Y5E5 795 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PCDHA3Q9Y5H8 950 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 PTPRJQ12913 1337 aa11.19□□□□□ -0.62
POLR2J3-201ENST00000379340 TMEM110-MUSTN1A8MSY1 372 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 AGPSO00116 658 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 PHF2O75151 1096 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 IL18RAPO95256 599 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 ASS1P00966 412 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 SRGAP2CP0DJJ0 459 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 MARK3P27448 753 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 PHKA2P46019 1235 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 RWDD2BP57060 319 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 MRPS25P82663 173 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 TNFAIP2Q03169 654 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 ARHGAP1Q07960 439 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 DRP2Q13474 957 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 KYAT1Q16773 422 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM187BQ17R55 369 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 DUOXA2Q1HG44 320 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 SGSM1Q2NKQ1 1148 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 SPDYCQ5MJ68 293 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 CFAP58Q5T655 872 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 RBBP8NLQ8NC74 664 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 ALG3Q92685 438 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 GDAP1L1Q96MZ0 367 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 APOBEC3GQ9HC16 384 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 PTPRHQ9HD43 1115 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 MTUS1Q9ULD2 1270 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 TNFSF13BQ9Y275 285 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
POLR2J3-201ENST00000379340 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 B4GALT4O60513 344 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 C22orf31O95567 290 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 TNNC2P02585 160 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ITGA4P13612 1032 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 GNA15P30679 374 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 MAPK4P31152 587 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF132P52740 706 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 DRG2P55039 364 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 MTFR1Q15390 333 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ZBTB41Q5SVQ8 909 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ATF7IP2Q5U623 682 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 EFCAB12Q6NXP0 572 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms