RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 GOLGA8MH3BSY2 632 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 YWHAGP61981 247 aaKnown RBP eCLIP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 LRRC63Q05C16 580 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PKN1Q16512 942 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 APPL1Q9UKG1 709 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 KIF28PB7ZC32 967 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CCRL2O00421 344 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 FAM58BPP0C7Q3 252 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 RCAN1P53805 252 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 HERVK_113P62684 666 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 MRPL28Q13084 256 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PICALMQ13492 652 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 TAF1BQ53T94 588 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 C4orf22Q6V702 233 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 USP37Q86T82 979 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 ANKMY2Q8IV38 441 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CCDC89Q8N998 374 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 GLMNQ92990 594 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PGM2Q96G03 612 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 HAPLN3Q96S86 360 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PABPC3Q9H361 631 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PIK3CDO00329 1044 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 GABBR2O75899 941 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 IL32P24001 234 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ADCY7P51828 1080 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 SNX32Q86XE0 403 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 FITM2Q8N6M3 262 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 EIF1ADQ8N9N8 165 aaKnown RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 PRKAB2O43741 272 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 GYG1P46976 350 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ALX1Q15699 326 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 AK8Q96MA6 479 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 DEPDC7Q96QD5 511 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ZBTB11O95625 1053 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 GNAZP19086 355 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 EEF1B2P24534 225 aaKnown RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 GPC3P51654 580 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 CLVS1Q8IUQ0 354 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-202ENST00000378161 LCORLQ8N3X6 602 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 MCRS1Q96EZ8 462 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 MAGEB18Q96M61 343 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 IRF2BPLQ9H1B7 796 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 QPCTLQ9NXS2 382 aa12.38□□□□□ -0.43
NPHP4-202ENST00000378161 ABL1P00519 1130 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CCNCP24863 283 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CHRNDQ07001 517 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SLC29A2Q14542 456 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ARL6IP4Q66PJ3 421 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 P2RX5Q93086 422 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SRPK1Q96SB4 655 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SPC25Q9HBM1 224 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SLC38A10Q9HBR0 1119 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SAR1AQ9NR31 198 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 TYW1Q9NV66 732 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 STK39Q9UEW8 545 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 DUSP10Q9Y6W6 482 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 H7C0C1 242 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CDC27P30260 824 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 KHDC1Q4VXA5 237 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CDH24Q86UP0 819 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ERLEC1Q96DZ1 483 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 OLFM1Q99784 485 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 FOXN1O15353 648 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 APOA1P02647 267 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 FOXO4P98177 505 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms